okjoh

okjoh's Stars

• beamandrew/medical-data

  5.8k336211.1k

• AIM-Harvard/pyradiomics

  Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics

  Language:Jupyter Notebook1.2k47554500

• yrosseel/lavaan

  an R package for structural equation modeling and more

  Language:R44344253101

• jibikbam/CNN-3D-images-Tensorflow

  3D image classification using CNN (Convolutional Neural Network)

  Language:Python2612015111

• mantchs/machine_learning_model

  机器学习基本模型算法介绍(附加案例)

  Language:Jupyter Notebook21550147

• cMadan/openMorph

  Curated list of open-access databases with human structural MRI data

  Language:Jupyter Notebook12625437

• donovan-h-parks/STAMP

  Statistical Analysis of Metagenomic Profiles

  Language:Python91134335

• sunhongfu/QSM

  Hongfu Sun's MATLAB codes for QSM reconstruction pipeline.

  Language:MATLAB728319

• pixmeo/osirixplugins

  Plugins for OsiriX DICOM Viewer

  Language:C++6935067

• hMRI-group/hMRI-toolbox

  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)

  Language:MATLAB6174644

• markallenthornton/MatlabTFCE

  Standalone MATLAB implementation of permutation TFCE correction

  Language:MATLAB4210422

• spisakt/pTFCE

  Probabilistic Threshold-Free Cluster Enhancement of Neuroimages

  Language:R386226

• davidssmith/DCEMRI.jl

  DCE MRI analysis in Julia

  Language:Julia3783416

• mathesong/kinfitr

  kinfitr: PET Kinetic Modelling Using R

  Language:R333157

• jknowles/SEMtutorialsR

  Tutorials for doing structural equation modeling in R.

  Language:R182015

• ME-ICA/me-ica

  Core code for ME-ICA command line interface

  Language:Python17131524

• atdemarco/svrlsmgui

  A graphical multivariate lesion-symptom mapping toolbox

  Language:MATLAB11293

• spisakt/pTFCE_spm

  pTFCE SPM Toolbox

  Language:MATLAB11344

• leoliuf/MatrixUser

  A lightweight GUI-based program for multi-dimensional data processing and analysis

  Language:MATLAB10302

• psiden/BFAST3D

  BFAST3D: Bayesian Fast Accurate Spatial Tricks in 3D. For fMRI analysis.

  Language:MATLAB10452

• HGGM-LIM/tracerkinetic

  This R package implements compartmental models and linear approximations needed to perform kinetic analysis on dynamic medical images. The provided functions use the tissue time-activity curves, the input function and the frame times as input, and return the kinetic parameters and the estimated errors.

  Language:R8411

• dhimmel/hodgkins

  Human disease network based on GWAS loci

  Language:Jupyter Notebook6305

• mribri999/ADCmap

  OsiriX plugin code (mac-only, objective C) to calculate apparent diffusion coefficient from MRI DICOM images.

  Language:Objective-C6118

• dmirman-zz/SVR-LSM

  Multivariate Lesion-Symptom Mapping Using Support Vector Regression

  Language:HTML3204

• cran/ldbounds

  :exclamation: This is a read-only mirror of the CRAN R package repository. ldbounds — Lan-DeMets Method for Group Sequential Boundaries

  Language:R2202

• roschkoenig/NMDAR-Ab_Encephalitis

  DCM analysis of NMDAR-Ab effects in a patients and a mouse model of NMDAR-Ab encephalitis.

  Language:Matlab2201

• spisakt/pTFCE_C

  c++ implementation of the pTFCE method (https://spisakt.github.io/pTFCE/)

  Language:C++2400

• dicemt/NODDIfix

  :brain: Should fix the NODDI's serious performance with MATLAB R2013b onwards

  Language:Matlab1100

• lsptb/ADCmap

  OsiriX plugin code (mac-only, objective C) to calculate apparent diffusion coefficient from MRI DICOM images.

  Language:Objective-C10

• rossetantoine/ADCmap

  OsiriX plugin code (mac-only, objective C) to calculate apparent diffusion coefficient from MRI DICOM images.

  Language:Objective-C1201