/sanger_analysis_pipeline

x86-64 Pipeline used to trim and combine sanger raw data to retrieve a consesus read and other results

Primary LanguagePythonMIT LicenseMIT

x86-64 Pipeline used to trim and combine sanger raw data to retrieve a consesus read and other results

To use the already build docker container, binary apps, usage, citations look up: DOI
If you modify the source code to use on your project please cite:

  1. Tsiouri, O. (2024). Sanger analysis pipeline: An x86-64 Pipeline used to trim and combine sanger raw data to retrieve a consesus read and other results (v2.0). Zenodo. https://doi.org/10.5281/zenodo.11358649
  2. Kuan-Hao Chao, Kirston Barton, Sarah Palmer, and Robert Lanfear (2021). "sangeranalyseR: simple and interactive processing of Sanger sequencing data in R" in Genome Biology and Evolution. DOI: doi.org/10.1093/gbe/evab028