omixer

Bioinformatics solutions provider

Omixer SolutionsWorldwide

Pinned Repositories

aws-genomics-workflows
Genomics Workflows on AWS
Language:Shell0 0 00
bioFreelancers
Freelance bioinformaticians directory
0 0 01
BiomIO
Lightweight, portable library for working with HDF5 BIOM files using Java.
Language:Java0 1 00
branches
code related to enterobranches
Language:R00
centrifuge
Classifier for metagenomic sequences
Language:C++0 1 00
dockeromixer
Docker files
Language:Dockerfile0 1 00
enterotypes
Language:R00
omixer-rpmR
An R interface to the omixer-rpm for turning metagenomic functional profiles into pathway/module profiles
Language:R11 2 95
omixer-rpm
A Reference Pathways Mapper for turning metagenomic functional profiles into pathway/module profiles.
Language:Java26 4 128
functree-ng
An interactive radial tree for functional hierarchies and omics data visualization
Language:HTML24 2 86

omixer's Repositories

omixer/omixer-rpmR
An R interface to the omixer-rpm for turning metagenomic functional profiles into pathway/module profiles
Language:R11 2 95
omixer/aws-genomics-workflows
Genomics Workflows on AWS
Language:Shell0 0 00
omixer/bioFreelancers
Freelance bioinformaticians directory
0 0 01
omixer/BiomIO
Lightweight, portable library for working with HDF5 BIOM files using Java.
Language:Java0 1 00
omixer/branches
code related to enterobranches
Language:R00
omixer/centrifuge
Classifier for metagenomic sequences
Language:C++0 1 00
omixer/dockeromixer
Docker files
Language:Dockerfile0 1 00
omixer/enterotypes
Language:R00
omixer/fastNGSadmix
Program for estimating admixture proportions and doing principal component analysis of a single NGS sample
Language:C++0 0 00
omixer/FUMA-webapp
Source code of FUMA GWAS web application
Language:HTML0 0 00
omixer/functree-cli
Command line implementation of FuncTree2
Language:JavaScript1 0
omixer/github-actions-for-ci
Language:JavaScript0 3
omixer/graphml-cyjs
Language:Groovy1 0
omixer/hap.py
Haplotype VCF comparison tools
Language:C++0 0
omixer/haplogrep-cmd
HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.
Language:Java1 0
omixer/hello-github-actions
Language:Dockerfile1 2
omixer/microbial_load_predictor
R package to predict microbial loads
omixer/omixer
omixer/omixer-utils
Language:Java1 0
omixer/PharmCAT
The Pharmacogenomic Clinical Annotation Tool
Language:Java0 0
omixer/QMP
Quantitative Microbiome Profiling
Language:R1 0
omixer/RaPID
Language:Python0 0
omixer/rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
Language:Rust1 0
omixer/snappy
A fast y-haplogroup caller for SNP data
Language:Python0 01
omixer/wdl
Workflow Description Language - Specification and Implementations
Language:Java0 0