oneilsh
Assistant Prof @ UNC Genetics | TISLab | Biomedical Informatics | Data Engineering | ML | Bioinformatics | Curious Learner & Passionate Educator
Department of Genetics, UNC Chapel HillCorvallis, OR
Pinned Repositories
dsosuk8s
DataScience@OregonState
agent-smith-ai
discovery_index
dpl_u19
Deep Learning for Life Scientists Pilot
fingertree_r
Alpha tests on monoid-annotated fingertrees in R.
rstackdeque
Stack and deque datatypes for R - fast and functional
rstackdeque_examples
Examples and timing tests for the rstackdeque R package.
SGE_Array
SGE_Parallel
tidytensor
Utilities for multidimensional arrays as named hierarchical structures
oneilsh's Repositories
oneilsh/rstackdeque
Stack and deque datatypes for R - fast and functional
oneilsh/tidytensor
Utilities for multidimensional arrays as named hierarchical structures
oneilsh/discovery_index
oneilsh/fingertree_r
Alpha tests on monoid-annotated fingertrees in R.
oneilsh/n3cutils
[Logic Liaison Template] ML Utils: Feature Vectorization and Incremental Training in Python
oneilsh/streamlit-kani
Streamlit-based UI for Kani LLM agents
oneilsh/.dotfiles
tmux, vim, zsh
oneilsh/apcb_second_edition
oneilsh/jrest
Command-line interface to axios for REST calls from JSON input on stdin.
oneilsh/apcb_2ed_bookdown
oneilsh/apcb_files
Supporting files for A Primer for Computational Biology
oneilsh/causal-simulator
oneilsh/curate-gpt
LLM-driven curation assist tool (pre-alpha)
oneilsh/docsify-js-template
Testing docsify
oneilsh/gpt-ontology-completion-analysis
oneilsh/k3s_deploy
Opinionated k3s deployment on stock images
oneilsh/kani-utils
Streamlit-based UI for Kani LLM agents
oneilsh/lda_pasc
Repository for Finding Long-COVID: Temporal Topic Modeling of Electronic Health Records from the N3C and RECOVER Programs
oneilsh/llm_tools_explore
oneilsh/lsd_r
Quick repo for explorations of rare diseases
oneilsh/n3c_example_project_public
Example use of oneilsh/n3c_workbook_parser
oneilsh/n3c_workbook_parser
A small utility to parse Code Workbook git exports.
oneilsh/oneilsh.github.io
Homepage
oneilsh/pkgdown
Generate static html documentation for an R package
oneilsh/redliner
An AI copy editor.
oneilsh/rocky2022
Supplemental poster images
oneilsh/SimKGC
ACL 2022, SimKGC: Simple Contrastive Knowledge Graph Completion with Pre-trained Language Models
oneilsh/streamlit-cookies-manager
Access and change cookies from your Streamlit script
oneilsh/tislab.org
Public-facing website for tislab.org
oneilsh/workbook1