/HemaScopeR

A Specialized Bioinformatics Toolkit Designed for Analyzing both Single-cell and Spatial Transcriptome Sequencing Data from Hematopoietic Cells

Primary LanguageRGNU General Public License v3.0GPL-3.0

HemaScopeR

Fig. 1 Authors: Zhenyi Wang and Yuxin Miao

Any suggestions and remarks might be addressed to Zhenyi Wang via wangzy17@tsinghua.org.cn, to Yuxin Miao via miaoyx21@mails.tsinghua.edu.cn, or 'Issues', and the authors will reply and address the issue within 12 hours.

HemaScopeR is a specialized bioinformatics toolkit designed for analyzing both single-cell and spatial transcriptome sequencing data from hematopoietic cells, including myeloid and lymphoid lineages.

HemaScopeR is described in the manuscript entitled:
[HemaScopeR: A Specialized Bioinformatics Toolkit Designed for Analyzing both Single-cell and Spatial Transcriptome Sequencing Data from Hematopoietic Cells](under review).

Installation

  • To install, follow the instructions in INSTALL.md

Tutorial

  • For usage instructions, follow the commands in TUTORIAL.md