oushujun/EDTA

Use of undefined variable `genome.EDTA.raw.fa.cln.cln` in EDTA.pl

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GallVp commented

The variable genome.EDTA.raw.fa.cln.cln on this line is undefined,

EDTA/EDTA.pl

Line 611 in 4f0424b

`perl $rename_TE $genome.EDTA.raw.fa.cln.cln > $genome.EDTA.TElib.fa`;

GallVp commented

I realised that cleanup_nested.pl on the previous lines saves the output with an additional .cln extension.

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