Pinned Repositories
AAV-barcode-detection-and-normalization
AAV_fitness_landscape
Analysis for "Comprehensive fitness landscape of AAV capsid reveals a viral gene and enables machine-guided design"
acpype
Please use OFFICIAL repo: https://github.com/alanwilter/acpype
alphafold
Open source code for AlphaFold.
ANARCI
Antibody Numbering and Antigen Receptor ClassIfication
AToM-OpenMM
OpenMM-based framework for absolute and relative binding free energy calculations with the Alchemical Transfer Method
autodock-vina
BAT.py
The Binding Affinity Tool (BAT.py) is a fully automated tool for absolute binding free energy calculations on protein-ligand systems, compatible with the AMBER20 and OpenMM 7 simulation packages.
PocketFlow
An Automatic Model Compression (AutoMC) framework for developing smaller and faster AI applications.
Sire
Sire Molecular Simulations Framework
owenustc's Repositories
owenustc/PocketFlow
An Automatic Model Compression (AutoMC) framework for developing smaller and faster AI applications.
owenustc/AAV-barcode-detection-and-normalization
owenustc/AAV_fitness_landscape
Analysis for "Comprehensive fitness landscape of AAV capsid reveals a viral gene and enables machine-guided design"
owenustc/acpype
Please use OFFICIAL repo: https://github.com/alanwilter/acpype
owenustc/ANARCI
Antibody Numbering and Antigen Receptor ClassIfication
owenustc/bnt162b2
Markdown version of Reverse Engineering the source code of the BioNTech/Pfizer SARS-CoV-2 Vaccine
owenustc/channels
Gaussian process models for optimizing channelrhodopsin properties.
owenustc/chisel3
Chisel 3
owenustc/docker-openmm
dockerfile for openmm
owenustc/fesetup
A tool for setting up free energy simulations.
owenustc/habitat-api
A modular high-level library to train embodied AI agents across a variety of tasks, environments, and simulators.
owenustc/hammock
Cluster up to millions of peptide sequences on shared sequence motifs.
owenustc/hh-suite
Remote protein homology detection suite.
owenustc/hmmhc
MHC class II binding prediction
owenustc/jqdatasdk
简单易用的量化金融数据包(easy utility for getting financial market data of China)
owenustc/LIG_Tool
Extract ligands from original PDB file
owenustc/models
Models and examples built with TensorFlow
owenustc/PDB_Tool
Extract structural features from original PDB file
owenustc/pmx
Toolkit for free-energy calculation setup/analysis and biomolecular structure handling
owenustc/Protein_Folding_Env
Protein modeling learning environment for deep reinforcement purpose.
owenustc/pymol-open-source
Open-source foundation of the user-sponsored PyMOL molecular visualization system.
owenustc/PySC2TencentExtension
owenustc/riscv-cores-list
RISC-V Cores, SoC platforms and SoCs
owenustc/sra-tools
SRA Tools
owenustc/TGT_Package
Generate A3M and TGT file from a given sequence in FASTA format.
owenustc/TImitate
owenustc/tleague_projpage
owenustc/trDesign
trRosetta for protein design
owenustc/VFLP
VirtualFlow for Ligand Preparation
owenustc/VFVS
VirtualFlow for Virtual Screening