ozborn

clinreason

Clinical Reasoning Ontology

gout_chief_complaint_alert

Code for AMIA 2020 Paper "Identification of Gout Flares in Chief Complaint Text Using Natural LanguageProcessing"

rlhf_attis2023

Google Colab friendly version of TRL's https://github.com/lvwerra/trl/blob/main/examples/toxicity/scripts/gpt-j-6b-toxicity.py example for ATTIS 2023.

BRATsynthetic

Python tool that generates realistic synthetic text for a superset of I2B2 2014 personal health information entity types.

ozborn/clinreason

Clinical Reasoning Ontology

ozborn/gout_chief_complaint_alert

Code for AMIA 2020 Paper "Identification of Gout Flares in Chief Complaint Text Using Natural LanguageProcessing"

ozborn/bratutils

A collection of utilities for manipulating data and calculating inter-annotator agreement in brat annotation files.

ozborn/cleartk-tutorials

ClearTK tutorials

ozborn/deeplearning4j

Deep Learning for Java, Scala & Clojure on Hadoop, Spark & GPUs

ozborn/dl4j-0.4-examples

Please use these examples based on deeplearning4j 0.4.* release.

ozborn/jbratuimatools

Java UIMA tools to handle analysis of BRAT annotations.

ozborn/libnd4j

ozborn/license-and-dua

The PhysioNet Data Use Agreement and License

ozborn/medics-schema

Schema at the University of Alabama at Birmingham for storing the results of Clinical NER

ozborn/nd4j

Fast, Scientific Computing for the JVM (NDArrays)

ozborn/practical-1

Oxford Deep NLP 2017 course - Practical 1: word2vec

ozborn/semeval-uima-tools

Type system and some annotators related to semeval NER tasks

ozborn/UiServer

Standalone UiServer for DeepLearning4j

ozborn/umlsIndex

Short code to do some simple indexing of UMLS.

ozborn/Word2VecJava

Word2Vec Java Port