ozlemmuslu

Pinned Repositories

• pubchem

  NCBI PubChem to BEL

  Language:Python5460

• nrl

  Network Representation Learning in Python with igraph

  Language:Python41

• emig-reimplemented

  Language:Python10

• guiltytargets

  Target prioritization using network representation learning

  Language:Python114

• guiltytargets-results

  Scripts to reproduce the results from "GuiltyTargets: Prioritization of Novel Therapeutic Targets with Deep Network Representation Learning"

  Language:Jupyter Notebook12

• guiltytargets-web

  Language:Python10

• GAT2VEC

  embedding attributed graphs

  Language:Python584624

• tronflow-bam-preprocessing

  Nextflow pipeline for the preprocessing of BAM files based on GATK best practices. Marking duplicates, realignment around indels, base quality score recalibration (BQSR) and reporting of metrics are optional to maintain flexibility for different use cases.

  Language:Nextflow5140

• tronflow-strelka2

  Strelka2 nextflow pipeline

  Language:Nextflow1100

• variantmedium

  2300

ozlemmuslu's Repositories