Spine Model
Repository for data analysis used in Morphologically constrained modeling of spinous inhibition in the somato-sensory cortex . If you are using this code, please cite:
O. Gemin et al. "Morphologically constrained modeling of spinous inhibition in the somato-sensory cortex", bioRxiv 2020.08.06.230722; doi: https://doi.org/10.1101/2020.08.06.230722
The python scripts provided here can be used to simulate a set of spines with different geometries, within a neuron environment.
To test it quickly you can open a docker container with the Dockerfile in folder docker and run scripts files: scripts_EL70 or finalscripts
- Python 3
- Neuron
- Jupyter/ipython
- Numpy
- Scipy
- Matplotlib