padix-key

biotite

A comprehensive library for computational molecular biology

gecos

Generated color schemes for sequence alignment visualizations

kmer-article

padix-key/biotite

A comprehensive library for computational molecular biology

padix-key/kmer-article

padix-key/ammolite-feedstock

A conda-smithy repository for ammolite.

padix-key/gecos

Generated color schemes for sequence alignment visualizations

padix-key/BinaryCIF

BinaryCIF is a data format for storing text based CIF files using a more efficient binary encoding.

padix-key/biotite-feedstock

A conda-smithy repository for biotite.

padix-key/conda-forge-pinning-feedstock

A conda-smithy repository for conda-forge-pinning.

padix-key/cython

The most widely used Python to C compiler

padix-key/DockQ

DockQ is a single continuous quality measure for protein docked models based on the CAPRI evaluation protocol

padix-key/dssp-feedstock

A conda-smithy repository for dssp.

padix-key/fastpdb

A high performance drop-in replacement for Biotite's PDBFile.

padix-key/gha-mamba

Test repository for reproducing Mamba issue in GitHub actions

padix-key/hydride

Adding hydrogens to molecular models

padix-key/hydride-feedstock

A conda-smithy repository for hydride.

padix-key/jaxtyping

Type annotations and runtime checking for shape and dtype of JAX/NumPy/PyTorch/etc. arrays. https://docs.kidger.site/jaxtyping/

padix-key/mdtraj

An open library for the analysis of molecular dynamics trajectories

padix-key/mini3di

A NumPy port of the foldseek code for encoding protein structures to 3di.

padix-key/MolecularNodes

Addon and nodes for working with structural biology and molecular data in Blender.

padix-key/ncbi-entrez-error-messages

A collection of error messages returned by NCBI Entrez

padix-key/openmm

OpenMM is a toolkit for molecular simulation using high performance GPU code.

padix-key/plinder

Protein Ligand INteraction Dataset and Evaluation Resource

padix-key/ProDy

A Python Package for Protein Dynamics Analysis

padix-key/pytest-issue

A small repository for issue reproduction

padix-key/rdkit

The official sources for the RDKit library

padix-key/rdkit-pypi

⚛️ RDKit Python Wheels on PyPI. 💻 pip install rdkit

padix-key/scanpy

Single-cell analysis in Python. Scales to >1M cells.

padix-key/single-cell-best-practices

https://www.sc-best-practices.org

padix-key/snakemake

This is the development home of the workflow management system Snakemake. For general information, see

padix-key/springcraft

Investigate molecular dynamics with elastic network models

padix-key/staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks