This repository contains code related to:
Stumpf et al. Transfer learning efficiently maps bone marrow cell types from mouse to human using single-cell RNA sequencing (2020).
Due to storage constraints, trained models and processed data used in this repository are archived on Mendeley data*:
*download these files and unzip to the project folder when cloning the repository.
Original scRNAseq data is available from ArrayExpress:
- https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-8629/
- https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-8630/
Pre-print: Stumpf et al. (2019) Mapping biology from mouse to man using transfer learning:
passt. (2020, October 19). passt/miceandmen: Code released with manuscript. (Version v1.0). Zenodo.