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covid19br
The goal of covid19br is to provide a permanent repository with data
and the entire history of corona virus cases in Brazil.
The package will be updated daily, including new data from the Ministry of Health(https://saude.gov.br/) made available through the platform IVIS.
See the package page for reference.
Current trend
An updated summary of the number of confirmed covid-19 cases in Brazil is presented here.
Installation
You can install the development version of covid19br from github with:
install.packages("devtools")
devtools::install_github(repo = "paternogbc/covid19br")Help
In R, documentation for covid19br dataset can be accessed with the
standard help command (e.g., ?covid_br_all and ?covid_br_states).
For a online description of the dataset, see reference page
Load the package data
library(covid19br)
# To get historical data for Brazil:
head(covid_br)
#> # A tibble: 6 x 9
#> region state state_ID state_uid suspected_cases confirmed_cases
#> <lgl> <chr> <chr> <lgl> <dbl> <dbl>
#> 1 NA Braz… BR NA 20 1
#> 2 NA Braz… BR NA 132 1
#> 3 NA Braz… BR NA 182 1
#> 4 NA Braz… BR NA 207 2
#> 5 NA Braz… BR NA 252 2
#> 6 NA Braz… BR NA 433 2
#> # … with 3 more variables: not_confirmed_cases <dbl>, deaths <dbl>, date <date>
# TO get historical data by state:
head(covid_states)
#> # A tibble: 6 x 9
#> region state state_ID state_uid suspected_cases confirmed_cases
#> <chr> <fct> <fct> <fct> <dbl> <dbl>
#> 1 Norde… Ceará CE 23 0 0
#> 2 Norde… Para… PB 25 1 0
#> 3 Norde… Pern… PE 26 1 0
#> 4 Norde… Bahia BA 29 0 0
#> 5 Sudes… Mina… MG 31 2 0
#> 6 Sudes… Espí… ES 32 1 0
#> # … with 3 more variables: not_confirmed_cases <dbl>, deaths <dbl>, date <date>
# TO get historical data by region:
head(covid_regions)
#> # A tibble: 6 x 9
#> region state state_ID state_uid suspected_cases confirmed_cases
#> <chr> <lgl> <lgl> <lgl> <dbl> <dbl>
#> 1 Centr… NA NA NA 0 0
#> 2 Norde… NA NA NA 2 0
#> 3 Sudes… NA NA NA 16 1
#> 4 Sul NA NA NA 2 0
#> 5 Centr… NA NA NA 10 0
#> 6 Norde… NA NA NA 15 0
#> # … with 3 more variables: not_confirmed_cases <dbl>, deaths <dbl>, date <date>Raw data
-
The raw data are downloaded via the package
coronabr[1] which provides an excellent function to download the raw data directly from the platform IVIS of the Ministry of Health. -
Data on the global number of cases were downloaded from Our World in Data.
Please note that the ‘covid19br’ project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.