paulatn240

paulatn240's Stars

• zhanghao-njmu/SCP

  An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

  Language:R32971

• Peihan-W/scRNA-seq_and_scBCR-seq

  Language:Jupyter Notebook1

• zktuong/dandelion

  dandelion - A single cell BCR/TCR V(D)J-seq analysis package for 10X Chromium 5' data

  Language:Jupyter Notebook9724

• pogorely/ALICE

  Detecting TCR involved in immune responses from single RepSeq datasets

  Language:R2513

• ncborcherding/scRepertoire

  A toolkit for single-cell immune profiling

  Language:R29748

• slowkow/awesome-vdj

  📚 Tools and databases for analyzing HLA and VDJ genes.

  19423

• kharchenkolab/dropEst

  Pipeline for initial analysis of droplet-based single-cell RNA-seq data

  Language:C++8543

• quadbio/scRNAseq_analysis_vignette

  Tutorial for scRNA-seq data analysis beginners using R

  12550

• xinyu-dev/igblast

  Detailed explanation on how to setup database for NCBI IgBlast executable, and using it in Python

  Language:Jupyter Notebook274

• ventolab/CellphoneDB

  CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.

  Language:Jupyter Notebook31250