Pinned Repositories
adaptor-sequence-parsing
Some scripts to parse out adaptor sequences from Illumina data - post demultiplexing
BioComb
Computational-Vision-Matlab
Some scripts written in Matlab for processing visual information
cutadapt
cutadapt removes adapter sequences from DNA sequencing reads
DiagnosticPathfinder
Intent of Diagnostic Pathfinder software is to help students learn a process for diagnostic reasoning. It does so by providing the history and lab data for a case, and requiring that users follow certain steps in order to provide a rationale that explains the data
dx-toolkit
DNAnexus platform client libraries.
genomic-finishing
scripts/tools to assist biologists/bioinformaticians to close genomes
jekyll
Jekyll is a blog-aware, static site generator in Ruby
projects
In-progress projects at Harvard School of Public Health Bioinformaitcs Core
SURF-Bio
paulmm's Repositories
paulmm/Computational-Vision-Matlab
Some scripts written in Matlab for processing visual information
paulmm/cutadapt
cutadapt removes adapter sequences from DNA sequencing reads
paulmm/DiagnosticPathfinder
Intent of Diagnostic Pathfinder software is to help students learn a process for diagnostic reasoning. It does so by providing the history and lab data for a case, and requiring that users follow certain steps in order to provide a rationale that explains the data
paulmm/jekyll
Jekyll is a blog-aware, static site generator in Ruby
paulmm/projects
In-progress projects at Harvard School of Public Health Bioinformaitcs Core
paulmm/SURF-Bio
paulmm/adaptor-sequence-parsing
Some scripts to parse out adaptor sequences from Illumina data - post demultiplexing
paulmm/BioComb
paulmm/dx-toolkit
DNAnexus platform client libraries.
paulmm/genomic-finishing
scripts/tools to assist biologists/bioinformaticians to close genomes
paulmm/GBA4iOS
A fast GBA emulator for the iPhone/iPod Touch based on version 1.8.0 of gpSPhone by zodttd (https://github.com/zodttd/gpSphone). This version can be compiled directly in Xcode and deployed just like any other app. No jailbreak required.
paulmm/node
evented I/O for v8 javascript
paulmm/rubytest
RoR ex
paulmm/SMRT-Analysis
SMRT® Analysis is PacBio's bioinformatics software suite for analyzing single molecule, real-time DNA sequencing data