pboesu
I'm an ecologist interested in the interplay between animals and the environments they inhabit. I like birds.
British Trust for OrnithologyCambridge, UK
Pinned Repositories
citizen_science_value
An example of how value could be calculated for a given Biodiversity Sampling Event (BSE)
DEB_inference_manuscript
Code and data for Boersch-Supan & Johnson (2019): Two case studies detailing Bayesian parameter inference for dynamic energy budget models.
debinfer
Bayesian inference for dynamical models of biological systems in R
DEButilities
Utility functions for Dynamic Energy Budget models
moultmcmc
Bayesian inference for models of moult.
pboesu.github.io
replication_candy_1991
This repository contains code, data, and a manuscript implementing and describing the replication of two publications that apply ordinal regression models to insect phenology data.
rucrdtw
R Bindings for the UCR Suite for fast time series subsequence search
schistosomiasis
Trait data relating to the temperature-specific transmission of human schistosomiasis for the paper by Nguyen, Boersch-Supan et al. 2021 PNAS
pboesu's Repositories
pboesu/debinfer
Bayesian inference for dynamical models of biological systems in R
pboesu/rucrdtw
R Bindings for the UCR Suite for fast time series subsequence search
pboesu/moultmcmc
Bayesian inference for models of moult.
pboesu/pboesu.github.io
pboesu/replication_candy_1991
This repository contains code, data, and a manuscript implementing and describing the replication of two publications that apply ordinal regression models to insect phenology data.
pboesu/citizen_science_value
An example of how value could be calculated for a given Biodiversity Sampling Event (BSE)
pboesu/DEB_inference_manuscript
Code and data for Boersch-Supan & Johnson (2019): Two case studies detailing Bayesian parameter inference for dynamic energy budget models.
pboesu/DEButilities
Utility functions for Dynamic Energy Budget models
pboesu/oSCR
oscar
pboesu/seabirdeb
Dynamic Energy Budget Models for Seabirds
pboesu/schistosomiasis
Trait data relating to the temperature-specific transmission of human schistosomiasis for the paper by Nguyen, Boersch-Supan et al. 2021 PNAS
pboesu/2019_replication_HastingsPowell_1991
2019 Replication of Hastings & Powell (1991) Chaos in a Three-Species Food Chain
pboesu/aos_sco_2021_moult_models
Slides for my #2021AOS_SCO talk on modelling avian moult phenology in R
pboesu/cesr
Tools to analyse EuroCES data
pboesu/DEBtool_M
DEBtool - package of DEB functions for Matlab
pboesu/docs
Documentation for the Stan language and CmdStan
pboesu/dopcalc
GPS constellation and dilution of precision calculations from almanac data
pboesu/ewp
EWP regression models for underdispersed count data
pboesu/example-models
Example models for Stan
pboesu/gamm-workshop
An introduction to GAM(M)s
pboesu/GenieR
Inference of demographic history from phylogeny
pboesu/ggeffects
Tidy Data Frames of Marginal Effects for ggplot2
pboesu/gratia
ggplot-based graphics and useful functions for GAMs fitted using the mgcv package
pboesu/ISEC_stan_course
A 6 hour course on Stan with Dan Simpson, Vianey Leos-Barajas, and Andrew MacDonald
pboesu/moult
Fork of the CRAN R package repository for "moult — Models for Analysing Moult in Birds " with some patches
pboesu/moult_phenology
Code for simulation studies and analyses for the manuscript "Extended molt phenology models improve inferences about molt duration and timing"
pboesu/moultcirc
Circular regression models for moult data
pboesu/moultmcmcExtra
bits and bobs that are not (yet) in the narrower scope of moultmcmc
pboesu/pboesu.r-universe.dev
R package binaries via r-universe
pboesu/weaver_moult
Example data and code for the manuscript "A demonstration of the value of recapture data for informing moult phenology models species with imperfect moult data"