/MAPITR

R package for 'MArginal ePIstasis Test for Regions' (Crawford & Ramachandran Labs)

Primary LanguageShellOtherNOASSERTION

MAPITR: MArginal ePIstasis Test for Regions

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The MAPITR R package provides accessible functions for running the algorithms described in...

If you find a bug, or you have a question or feedback on our work, please post an issue.

Citing this work

If you find the MAPITR package or any of the source code in this repository useful for your work, please cite:

Turchin MC, Darnell G, Crawford L, and Ramachandran S (2020) "...

License

Copyright (c) 2020, Michael Turchin, Sohini Ramachandran, and Lorin Crawford.

All source code and software in this repository are made available under the terms of the MIT license. See file LICENSE for the full text of the license.

Quick Start

To install MAPITR from CRAN:

install.packages("MAPITR")

To install the most recent dev version of MAPITR from github:

install.packages("devtools")
devtools::install_github("mturchin20/MAPITR@v1.0.3", build_vignettes=TRUE)

Once you have installed the package, load the package in R:

library("MAPITR")

Next, view and run the example code provided in the introductory vignette using simulated data.

Credits

The MAPITR R package was developed by Michael Turchin at the [Brown University][brownu], with contributions from Greg Darnell and Lorin Crawford.