Parallel Computing and Data Science Lab (Saeed Lab)
A scalable datascience lab led by Dr. Fahad Saeed.
United States of America
Pinned Repositories
ASD-DiagNet
ASD-SAENet
Auto-ASD-Network
Fast-GPU-PCC
GPU-ArraySort-2.0
This version of GPU-ArraySort is capable of sorting large number of variable sized arrays, also includes some big fixes.
GPU-DFC
gpu-sfft
The implementation of the GPU-SFFT algorithm
MaSS-Simulator
source for the MaSS-Simulator
PCDSLab.github.io
Website for the Parallel Computing and Data Science Lab (Saeed Lab) at FIU
slmindex
SLM-Transform: Fast and Memory-Efficient MS/MS Spectra Indexing for Peptide Search in Mass-Spectrometry based Proteomics
Parallel Computing and Data Science Lab (Saeed Lab)'s Repositories
pcdslab/ASD-DiagNet
pcdslab/Fast-GPU-PCC
pcdslab/gpu-sfft
The implementation of the GPU-SFFT algorithm
pcdslab/slmindex
SLM-Transform: Fast and Memory-Efficient MS/MS Spectra Indexing for Peptide Search in Mass-Spectrometry based Proteomics
pcdslab/Auto-ASD-Network
pcdslab/ASD-SAENet
pcdslab/GPU-DFC
pcdslab/MaSS-Simulator
source for the MaSS-Simulator
pcdslab/mspconverter
A package to convert tandem mass spectra files from MSP to MGF format
pcdslab/SpeCollate
pcdslab/TurboBFS
A highly scalable GPU-based set of top-down and bottom-up BFS algorithms in the language of linear algebra.
pcdslab/GiCOPS
HiCOPS & GiCOPS : Computational framework for peptide identification from MS data through accelerated database search
pcdslab/J-Eros
pcdslab/MAESTRO
An interconnected set of open source machine-learning models for large-scale mass spectrometry based omics analysis.
pcdslab/MSREDUCE
source code for MSREDUCE
pcdslab/PCDSLab.github.io
Website for the Parallel Computing and Data Science Lab (Saeed Lab) at FIU
pcdslab/.github
pcdslab/MLSPred-Bench
MLSPred-Bench: Reference EEG Benchmark for Prediction of Epileptic Seizures
pcdslab/PVTAD
pcdslab/ASD-DiagNet-Confounds
pcdslab/empirical-seizure-study
pcdslab/Graph-DOM
Graph-DOM is a tool to analyze comprehensive fragmentation data for dissolved organic matter (DOM) using graph algorithms.
pcdslab/Instruction_roofline_scripts
Instruction Roofline Scripts for GiCOPS and ADEPT
pcdslab/lbdslim
Load Balancing Algorithm for Distributed SLM-Transform (DSLIM)
pcdslab/ProteoRift
End-to-end machine-learning pipeline for peptide database search
pcdslab/SLMIndexBeta
The implementation of SLM-Index v0.7beta integrated into Comet-MS v2016.03 codebase
pcdslab/specollate-page
Webpage for SpeCollate
pcdslab/SPERTL
pcdslab/TurboBC
A memory efficient and highly scalable GPU-based set of Betweenness Centrality (BC) algorithms in the language of linear algebra.
pcdslab/UtilLLM_EPS