Pinned Repositories
AMRWithinHost
Code to reproduce the results of the manuscript "Stochastic within-host dynamics of antibiotic resistance: Resistant survival probability, size at the end of treatment and carriage time after treatment"
BlochmanniaStats
Statistical analysis (generalized linear model) of data from the manuscript "Harbouring Blochmannia incurs costs ..." published in Myrmecological News.
early_epidemic_inference
Transcripts-gain-and-loss
virus_establishment
Within-host virus dynamics. Repository accompanying the manuscript "Predicted success of prophylactic antiviral therapy to block or delay SARS-CoV-2 infection depends on the targeted mechanism" (doi: 10.1101/2020.05.07.20092965)
YLL_computation
estimate-emergence-from-data
Code for reproducing the results from the preprint "Using early detection data to estimate the date of emergence of an epidemic outbreak".
pczuppon's Repositories
pczuppon/BlochmanniaStats
Statistical analysis (generalized linear model) of data from the manuscript "Harbouring Blochmannia incurs costs ..." published in Myrmecological News.
pczuppon/AMRWithinHost
Code to reproduce the results of the manuscript "Stochastic within-host dynamics of antibiotic resistance: Resistant survival probability, size at the end of treatment and carriage time after treatment"
pczuppon/Transcripts-gain-and-loss
pczuppon/early_epidemic_inference
pczuppon/virus_establishment
Within-host virus dynamics. Repository accompanying the manuscript "Predicted success of prophylactic antiviral therapy to block or delay SARS-CoV-2 infection depends on the targeted mechanism" (doi: 10.1101/2020.05.07.20092965)
pczuppon/YLL_computation