Pinned Repositories
gatk
Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk repository
cmdline_utils
A collection of useful custom command line utilities
kallisto
Near-optimal RNA-Seq quantification
new_environment
Initialize a new compute environment
scuttle
A command-line utility, a la samtools, that helps to manage and manipulate single-cell data files
SeqLib
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
velocyto.R
RNA velocity estimation in R
vexd
Source code for the VExD website at https://vexd.cchmc.org
Virus-Disease
htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
pdexheimer's Repositories
pdexheimer/scuttle
A command-line utility, a la samtools, that helps to manage and manipulate single-cell data files
pdexheimer/vexd
Source code for the VExD website at https://vexd.cchmc.org
pdexheimer/cmdline_utils
A collection of useful custom command line utilities
pdexheimer/kallisto
Near-optimal RNA-Seq quantification
pdexheimer/new_environment
Initialize a new compute environment
pdexheimer/SeqLib
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
pdexheimer/velocyto.R
RNA velocity estimation in R
pdexheimer/Virus-Disease