pedrocr83

pedrocr83's Stars

• danielnsilva/semanticscholar

  Unofficial Python client library for Semantic Scholar APIs.

  Language:Python35949

• Codium-ai/AlphaCodium

  Official implementation for the paper: "Code Generation with AlphaCodium: From Prompt Engineering to Flow Engineering""

  Language:Python3.8k284

• morris-lab/CellOracle

  This is the alpha version of the CellOracle package

  Language:Python34360

• pditommaso/awesome-pipeline

  A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

  6.3k632

• donovan-h-parks/STAMP

  Statistical Analysis of Metagenomic Profiles

  Language:Python9335

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.3k1k

• muellan/metacache

  memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping

  Language:C++5813

• replicate/cog

  Containers for machine learning

  Language:Python8.5k594

• davidrmiller/biosim4

  Biological evolution simulator

  Language:C++3.3k468

• idekerlab/DrugCell

  A visible neural network model for drug response prediction

  Language:Python14155

• ucsd-ccbb/VAPr

  VAPr: A Python package for NoSQL variant data storage, annotation and prioritization

  Language:Python363

• VivekShri/PyProwess

  Includes example codes in python to leverage some great features of the programming language

  162

• DenefLab/MicrobeMiseq

  Set of useful functions and scripts for analyzing amplicon Miseq data.

  Language:HTML1716

• ebolyen/built-iab

  The latest Jupyter notebooks for An Introduction to Applied Bioinformatics.

  Language:Jupyter Notebook1

• caporaso-lab/tax-credit

  A repository for storing code and data related to a systematic comparison of short read taxonomy assignment tools

  Language:Jupyter Notebook169

• MariaNattestad/Ribbon

  A genome browser designed for complex structural variants and long reads.

  Language:JavaScript28030

• caporaso-lab/mockrobiota

  A public resource for microbiome bioinformatics benchmarking using artificially constructed (i.e., mock) communities.

  Language:Python7835

• Pulkit-Khandelwal/Reinforcement-Learning-Notebooks

  A collection of Reinforcement Learning algorithms from Sutton and Barto's book and other research papers implemented in Python.

  Language:Jupyter Notebook1k198

• simpleai-team/simpleai

  simple artificial intelligence utilities

  Language:Python980248

• longhao001/data-science-resources

  Language:Jupyter Notebook29343

• bioconda/bioconda-recipes

  Conda recipes for the bioconda channel.

  Language:Shell1.7k3.4k

• kailashahirwar/cheatsheets-ai

  Essential Cheat Sheets for deep learning and machine learning researchers https://medium.com/@kailashahirwar/essential-cheat-sheets-for-machine-learning-and-deep-learning-researchers-efb6a8ebd2e5

  15.2k3.4k

• seandavi/awesome-cancer-variant-resources

  A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

  30972

• lexfridman/mit-deep-learning

  Tutorials, assignments, and competitions for MIT Deep Learning related courses.

  Language:Jupyter Notebook10.3k2.2k

• owainlewis/awesome-artificial-intelligence

  A curated list of Artificial Intelligence (AI) courses, books, video lectures and papers.

  11.7k2k

• CSAILVision/gandissect

  Pytorch-based tools for visualizing and understanding the neurons of a GAN. https://gandissect.csail.mit.edu/

  Language:Python1.8k280

• WGLab/InterVar

  A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline

  Language:Python19193

• gregcaporaso/An-Introduction-To-Applied-Bioinformatics

  Interactive lessons in bioinformatics.

  Language:Python85

• facebookresearch/Detectron

  FAIR's research platform for object detection research, implementing popular algorithms like Mask R-CNN and RetinaNet.

  Language:Python26.3k5.4k

• DragonComputer/Dragonfire

  the open-source virtual assistant for Ubuntu based Linux distributions

  Language:Python1.4k215