peipp410
SJTU23 | Majoring in bioinformatics
Shanghai Institute of Biochemistry and Cell Biology, CASShanghai
peipp410's Stars
seandavi/awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
bowang-lab/scGPT
graphdeeplearning/graphtransformer
Graph Transformer Architecture. Source code for "A Generalization of Transformer Networks to Graphs", DLG-AAAI'21.
OmicsML/awesome-deep-learning-single-cell-papers
jvpoulos/causal-ml
Must-read papers and resources related to causal inference and machine (deep) learning
mdozmorov/scRNA-seq_notes
A list of scRNA-seq analysis tools
dylkot/cNMF
Code and example data for running Consensus Non-negative Matrix Factorization on single-cell RNA-Seq data
theislab/single-cell-transformer-papers
TimeLovercc/Awesome-Graph-Causal-Learning
A list of Graph Causal Learning materials.
JackieHanLab/TOSICA
Transformer for One-Stop Interpretable Cell-type Annotation
SONGDONGYUAN1994/scDesign3
scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics
tiroshlab/3ca
Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".
gabrielakinker/CCLE_heterogeneity
LiQian-XC/sctour
A deep learning architecture for robust inference and accurate prediction of cellular dynamics
xiaoyeye/TFvelo
zdebruine/singlet
Single-cell analysis with non-negative matrix factorization
kunwang34/PhyloVelo
PhyloVelo, Phylogeny-based transcriptomic velocity of single cells
mutualinfo/mutual_info
Putting GaelVaroquaux's mutual_info gist in a project until it has a better home.
Spencerfar/LatentVelo
gevaertlab/GBM360
Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications
rohitarorayyc/SpatialTranscriptomics
Spatial Transcriptomic Analysis of OSCC samples
yzf072/spaTrack
SlavovLab/SCoPE2
GSK-AI/seq2cells
zhangqib/CIDER
office implement of CIDER for Paper `Counterfactual-Invariant Diffusion-based GNN Explainer for Causal Subgraph Inference`
smsxiaomayi/LDD
Landscape of Differentiation Dynamics
LinLi-0909/NME
Single-cell causal network inference based on neighbor cross-mapping entropy
egotist0/DB-Operators
Physical operators implemented for a relational database using the iterator model.
GufengYu520/gufengyu520.github.io
15754311016/SPNet