Processing of single-cell (Fluidigm C1 and 10x) and population (Truseq and brbseq) RNA-seq data related to Areg discovery and characterisation in mouse subcutaneous stromal vascular fraction cells
- sh folder contains alignment related analyses (filtering, QC, STAR alignment and htseq counts)
- R folder contains all downstream processing functionality
- data folder contains input data (.csv and countmatrices e.g.) as well as intermediary and annotation files (.RDatas)