Center for Neuroengineering and Therapeutics
240 S. 33rd Street Hayden Hall, Room 301 Univ. of Pennsylvania Philadelphia, PA 19104
Pinned Repositories
Arnold_simulated_clinical_trial
cnt_organization_README
Information and examples for contributing to the penn-cnt organization :bookmark:
CNT_research_tools
CNT-approved research tools
DeepResection
Code for neurosurgery resection zone segmentation on T1 MRI.
ieeg-recon
IEEG electrode reconstruction: modular pipeline in MATLAB and Python
RNS_processing_toolbox
This repository contains code for processing and analyzing data from the responsive neurostimulation (RNS) device by NeuroPace.
Scheid_EC_network_tools
Tools for effective connectivity network generation and analysis
Scheid_RNS-IEEG-Biomarkers
Pipeline for analysis in Scheid et al. Intracranial electroencephalographic biomarker predicts effective responsive neurostimulation for epilepsy prior to treatment. Epilepsia. 2022
TLE_Gradients
voxTool
Center for Neuroengineering and Therapeutics's Repositories
penn-cnt/ieeg-recon
IEEG electrode reconstruction: modular pipeline in MATLAB and Python
penn-cnt/RNS_processing_toolbox
This repository contains code for processing and analyzing data from the responsive neurostimulation (RNS) device by NeuroPace.
penn-cnt/CNT_research_tools
CNT-approved research tools
penn-cnt/Pattnaik-seizure-severity
Code for "A quantitative tool for seizure severity: diagnostic and therapeutic applications"
penn-cnt/R01_R61_Pipeline
penn-cnt/TLE_Gradients
penn-cnt/multimodal_excitation_inhibition
Normative modeling and multimodal correspondence of excitation-inhibition (E:I) ratio
penn-cnt/RNS_STIM-MORPHOLOGY
Analyzing how the functional and structural connectome predict response to repeated therapeutic stimulation.
penn-cnt/voxTool
penn-cnt/BiTLE_Segregation
Repository for analyses related to the manuscript: "Resting State Functional Connectivity Demonstrates Increased Segregation in Bilateral Temporal Lobe Epilepsy"
penn-cnt/CNT-codehub
Code repository and pipeline manager for Penn’s Center for Neuroengineering & Therapeutics.
penn-cnt/CNT_EEG_TEMPLATE
EEG focused fork of the Penn CNT code repository.
penn-cnt/CNT_IMAGING_TEMPLATE
penn-cnt/CNT_Preprocessing_Toolkit
Toolkit for pre-processing of intracranial EEG data, and an interactive pipeline for pre-processing method evaluation.
penn-cnt/CNT_Research_Template
Research template repository for the University of Pennsylvania CNT lab
penn-cnt/cnt_tle_laterality
penn-cnt/collaborator_repository
Repository for sharing code with collaborators
penn-cnt/DATA-ECO_BIDS-CONVERTER
Bids conversion scripts for data collaborations
penn-cnt/epilepsy_lateralization
penn-cnt/fMRI_HUP2BIDS
Python Heudiconv Wrapper for HUP fMRI to BIDS format conversion
penn-cnt/generalization_of_nlp_in_clinical_contexts
penn-cnt/IEEG_atlas_Sinha
IEEG atlas code originally developed by Nishant Sinha
penn-cnt/IEEG_Spike-Morphology
penn-cnt/LDA-subfield-atrophy
penn-cnt/NLP_Disparities_in_Seizure_Freedom
penn-cnt/Pattnaik-sleep-atlas
Code for normative atlases in sleep
penn-cnt/pennsieve-workflow_bid-validator
A simple workflow for Pennsieve to validate bids datasets.
penn-cnt/scalp_deep-learning
Code repository and pipeline manager for Penn’s Center for Neuroengineering & Therapeutics.
penn-cnt/Sixth_Sense
penn-cnt/Text_Mining_Epilepsy_Outcomes