Pinned Repositories
AmazonCommentMiner
beast-mcmc
Bayesian Evolutionary Analysis Sampling Trees
grails-core
The Grails Web Application Framework
MS-GSP
MS-GSP implementation for CS 583 at UIC
zookeeper-leader-election
A simple library for Apache ZooKeeper leader election
perezrathke's Repositories
perezrathke/zookeeper-leader-election
A simple library for Apache ZooKeeper leader election
perezrathke/beast-mcmc
Bayesian Evolutionary Analysis Sampling Trees
perezrathke/BindingInteraction
perezrathke/boost.simd
Portable SIMD computation library - To be proposed as a Boost library
perezrathke/bumps
Data fitting with uncertainty analysis
perezrathke/CRoaring
Roaring bitmaps in C (and C++)
perezrathke/CS.UIC.THESIS.TEMPLATE
perezrathke/fastbook
The fastai book, published as Jupyter Notebooks
perezrathke/jarad.github.com
Github userpage
perezrathke/minicsv
Automatically exported from code.google.com/p/minicsv
perezrathke/neofox
Annotation of mutated peptide sequences (mps) with published or novel potential neo-epitope descriptors
perezrathke/NeoFuse
NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.
perezrathke/ompg-public
Loop simulations for Outer Membrane Protein G
perezrathke/plyrmr
perezrathke/provis
Official code repository of "BERTology Meets Biology: Interpreting Attention in Protein Language Models."
perezrathke/pyemd
Fast EMD for Python: a wrapper for Pele and Werman's C++ implementation of the Earth Mover's Distance metric
perezrathke/ravro
perezrathke/rbm-mhc
Python3 script to implement RBM-MHC - a predictor for class I antigen presentation - described in Bravi et al. 2020 (https://www.biorxiv.org/content/10.1101/2020.04.25.061069v1)
perezrathke/RHadoop
RHadoop
perezrathke/rhbase
A package that allows R developers to use Hadoop HBase
perezrathke/rhdfs
A package that allows R developers to use Hadoop HDFS
perezrathke/rmr2
A package that allows R developer to use Hadoop MapReduce
perezrathke/SeqDesign
Protein design and variant prediction using autoregressive generative models
perezrathke/sparsepp
A fast, memory efficient hash map for C++
perezrathke/tcr_classifier
Predicting T Cell Receptor Specificity with Deep Learning
perezrathke/TCRdock
python tools for TCR:peptide-MHC modeling and analysis
perezrathke/TITAN
T Cell Receptor Specificity Prediction with Bimodal Attention Networks
perezrathke/tracer
perezrathke/USMPep
Major Histocompatibility Complex (MHC) Binding Affinity Prediction
perezrathke/zstr
A C++ header-only ZLib wrapper