Issues
- 0
Issue with meffil.ewas model
#60 opened - 0
usage of cell type output
#59 opened - 0
add new saliva reference
#58 opened - 5
Issue in meffil:::guess.featureset
#57 opened - 4
meffil.qc.summary Error and Warning
#56 opened - 1
qc.summary warning about scale guides
#55 opened - 0
warning message from meffil.ewas.summary()
#54 opened - 0
- 4
- 4
Normalization function creates many NAs
#51 opened - 0
450k, epicv1, and epicv2
#50 opened - 2
- 5
- 2
meffil.ewas.summary with GDS
#47 opened - 2
- 1
Checks for sample swap detection
#44 opened - 1
DMPs vs DMRs
#43 opened - 1
ewas / champ output comparison
#42 opened - 2
Guidance on plink step in QC
#41 opened - 4
Length > 1 error on R 4.2
#40 opened - 2
qc.objects - annotation
#39 opened - 1
add new cell type reference
#38 opened - 0
meffil.ewas.summary coerce error
#37 opened - 3
Start with methlyation level table
#36 opened - 0
Testing more than one phenotype
#35 opened - 1
Cell composition
#34 opened - 5
- 5
- 2
Normalize a subset of samples
#31 opened - 1
Figure sub-folder in the EWAS report
#30 opened - 4
- 3
- 1
- 3
- 1
normalized control probe values
#25 opened - 3
- 0
genotype check related samples
#23 opened - 0
- 0
Meffil - coding of unknown phenotypes
#20 opened - 4
27k Support
#19 opened - 2
new cell type reference
#18 opened - 1
load-epic-manifest
#17 opened - 2
Workflow validation
#16 opened - 4
Version conflicts with CopyNumber450k
#15 opened - 1
EWAS: Multiple testing correction
#14 opened - 1
- 2
Import/Convert minfi objects?
#12 opened - 2
Negative estimated cell counts?
#11 opened - 7
Imputation Issue
#10 opened - 2
QC Reports
#9 opened