petrov-lab/HAFpipe-line

Issues

• unknown flag issues

  #10 opened a year ago by jeremysutherland
  1

• Harp installation

  #1 opened 2 years ago by Thatguy027
  1

• Task 1 creation of numeric SNP table needs an unreasonable amount of memory

  #7 opened 2 years ago by lczech
  1

• Wrong file naming for `simpute` method

  #4 opened 2 years ago by lczech
  1

• Task 4 does not allow for parallel execution when using Task 2 (imputation)

  #5 opened 2 years ago by lczech
  0

• Task 1 does not create SNP table unless FILTER "PASS" is present

  #6 opened 2 years ago by lczech
  0

• Error in `rownames<-(*tmp*, value = logical(0))`

  #3 opened 2 years ago by lczech
  3

• Running on founders with VCF without ##contig

  #2 opened 2 years ago by lczech
  1