pgbrodrick/bfg-nets

Issues

• Training data not created correctly when response files are .shp format instead of .tif

  #104 opened 3 years ago by rachelemason
  0

• Example script crashes when bfgn is installed using provided environment.yaml files

  #103 opened 3 years ago by rachelemason
  0

• Add checkpointing to the data build

  #101 opened 5 years ago by nsfabina
  0

• Draw representative sample distribution from built data

  #100 opened 5 years ago by nsfabina
  0

• Replace loss window radius with output layer of correct dimensions?

  #99 opened 5 years ago by nsfabina
  0

• Separate data and model logging better

  #68 opened 5 years ago by nsfabina
  1

• Add node/cluster IDs to logging for distributed systems

  #78 opened 5 years ago by nsfabina
  1

• Allow users to turn off logging and/or use their own loggers

  #79 opened 5 years ago by nsfabina
  1

• Fix logging making it into slurm.out and slurm.error

  #80 opened 5 years ago by nsfabina
  1

• Fix logging screwing up tqdm progress bars

  #81 opened 5 years ago by nsfabina
  1

• Add data build logs to experiment logs

  #83 opened 5 years ago by nsfabina
  1

• Propagate keras and tqdm (maybe) log lines to log files

  #84 opened 5 years ago by nsfabina
  1

• Ensure that loggers are not instantiated multiple times, avoid duplicated lines

  #85 opened 5 years ago by nsfabina
  1

• Fix indexing issue with sample plots

  #90 opened 5 years ago by nsfabina
  1

• Add coverage into tox tests

  #65 opened 5 years ago by nsfabina
  0

• Add -co BIGTIFF=IF_SAFER for application functions

  #86 opened 5 years ago by nsfabina
  1

• Remove "error" from log line to avoid inclusion in log summary

  #91 opened 5 years ago by nsfabina
  1

• Use config's feature nodata value for exclusion in application functions?

  #98 opened 5 years ago by nsfabina
  1

• data augmentation

  #93 opened 5 years ago by pgbrodrick
  3

• add additional nodata_maximum_fractions

  #49 opened 5 years ago by pgbrodrick
  0

• report regression metrics

  #76 opened 5 years ago by pgbrodrick
  0

• Reporter: workup histograms, for Phil

  #63 opened 5 years ago by nsfabina
  4

• Cleanup apply_model_to_raster naming and API

  #92 opened 5 years ago by nsfabina
  8

• Move application functions to own module?

  #71 opened 6 years ago by nsfabina
  2

• maximum_likelihood_classification error when applied to application function output

  #70 opened 5 years ago by nsfabina
  0

• add number of report samples to plot into settings file

  #75 opened 5 years ago by pgbrodrick
  2

• Dependent on tensorflow==2.0: fix use_multiprocessing (see discussion)

  #61 opened 6 years ago by nsfabina
  2

• generally fix existing comparison plots

  #89 opened 5 years ago by nsfabina
  0

• divide multiple model reports into "quick" and "detailed", based on time needed

  #88 opened 5 years ago by nsfabina
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• differentiate between single model and comparison reports in reporting module

  #87 opened 5 years ago by nsfabina
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• Ensure that databuild/experiment logs make it to only the associated log files

  #82 opened 5 years ago by nsfabina
  0

• application functions should check that application files are valid

  #72 opened 6 years ago by nsfabina
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• enable multiple features per site (as per training) in application

  #73 opened 6 years ago by pgbrodrick
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• report: consider aligning prediction and response ranges

  #74 opened 6 years ago by pgbrodrick
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• Fix uncaught / uninformative errors on data build with no raw files

  #69 opened 6 years ago by nsfabina
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• better handle vector boundary files

  #67 opened 6 years ago by pgbrodrick
  0

• add instructions about a pip install

  #66 opened 6 years ago by pgbrodrick
  0

• Experiment: use validation score as early-stopping criteria, not training score

  #58 opened 6 years ago by nsfabina
  3

• Reporter: reference data_container and experiment configs, not config as argument

  #54 opened 6 years ago by nsfabina
  0

• Reporter: add page with printed warnings and errors from log file

  #55 opened 6 years ago by nsfabina
  0

• Reporter: reference data type parameters to check for continuous or categorical data

  #57 opened 6 years ago by nsfabina
  1

• Configs: use absolute paths in config

  #64 opened 6 years ago by nsfabina
  1

• Config: sections need fleshed out validity checks

  #59 opened 6 years ago by nsfabina
  1

• Reporter: clean up reports, misc changes

  #62 opened 6 years ago by nsfabina
  0

• Dependencies: switch from keras to tf.keras after tensorflow 2.0 is stable

  #60 opened 6 years ago by nsfabina
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• Reporter: add "spatial confusion matrices" to results

  #56 opened 6 years ago by nsfabina
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• Report: incorporate weights in spatial error plots for categorical and regression

  #53 opened 6 years ago by nsfabina
  0

• Report: get representative samples for batches, incorporating a variety of classes or features

  #52 opened 6 years ago by nsfabina
  0

• enable multi-file scaling

  #47 opened 6 years ago by pgbrodrick
  0

• incorrect projection error

  #51 opened 6 years ago by pgbrodrick
  0