Automated tests for parsers
fmaguire opened this issue · 4 comments
fmaguire commented
Tests need implemented for new parsers
cimendes commented
I think this was also assigned to me?
fmaguire commented
Don't worry too much about tight integration with code, just automated functional tests (i.e. known input == expected output) for each of the parsers for now.
I'll modify them to use the refactored parser library later on
cimendes commented
parser output tests:
- abricate
- amrfinder
- amrplusplus
- ariba
- deepARG
- groot
- kmerresistance
-
mykrobe -
pointfinder - resfams
- resfinder
- rgi
- srax
- srst2
- c-sstar
- staramr