Pinned Repositories
bigmemoryExtras
Persistent memory mapped matrices and factors
BioSequences.jl
Biological sequences for the julia language
FASTX.jl
Parse and process FASTA and FASTQ formatted files of biological sequences.
GaussianMixtures.jl
Large scale Gaussian Mixture Models
GenomicFeatures.jl
Tools for genomic features in Julia.
GenomicVectors.jl
Computations on genome locations, inspired by BioConductor.
genoset
Tools for data with genomic coordinates
GLMNet.jl
Julia wrapper for fitting Lasso/ElasticNet GLM models using glmnet
IntervalTrees.jl
A data structure for efficient manipulation of sets of intervals
RLEVectors.jl
Run Length Encoded vectors for julia, inspired by BioConductor.
phaverty's Repositories
phaverty/RLEVectors.jl
Run Length Encoded vectors for julia, inspired by BioConductor.
phaverty/GenomicVectors.jl
Computations on genome locations, inspired by BioConductor.
phaverty/bigmemoryExtras
Persistent memory mapped matrices and factors
phaverty/BioSequences.jl
Biological sequences for the julia language
phaverty/FASTX.jl
Parse and process FASTA and FASTQ formatted files of biological sequences.
phaverty/GaussianMixtures.jl
Large scale Gaussian Mixture Models
phaverty/GenomicFeatures.jl
Tools for genomic features in Julia.
phaverty/genoset
Tools for data with genomic coordinates
phaverty/GLMNet.jl
Julia wrapper for fitting Lasso/ElasticNet GLM models using glmnet
phaverty/IntervalTrees.jl
A data structure for efficient manipulation of sets of intervals
phaverty/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
phaverty/rjulia
R package which integrating R and Julia
phaverty/TileDB-R
R interface to the TileDB storage manager