phcerdan

InsightJournal

Insight Journal

ITK

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

ITKIsotropicWavelets

External Module for ITK, implementing Isotropic Wavelets and Riesz Filter for multiscale phase analysis.

ITKTotalVariation

External Module for Total Variation Algorithms, providing wrap for https://github.com/albarji/proxTV

configuration_files

My configuration files, including dot_files, vim, and scripts.

histogram

Histogram in C++11, 1D, simple header-only, inspired by R, calculate and optimize breaks automatically. Accepts different precissions.

perm-montecarlo

PERM: Prune and Enriched Rosenbluth Method. A sequential Montecarlo algorithm with resampling

SGEXT

Spatial Graph Extractor. Library and scripts to study graphs extracted from binary images, or to generate graphs and analyze them completely in-silico. Used at least in biopolymers simulations and vascular networks.

vtkImGuiAdapter

Adapter to add imgui to an existing vtkRenderWindow using SDL2.

wolfram_model

Python Wrappings for exploring Set Substitution Systems (Wolfram Models)

phcerdan/vtkImGuiAdapter

Adapter to add imgui to an existing vtkRenderWindow using SDL2.

phcerdan/configuration_files

My configuration files, including dot_files, vim, and scripts.

phcerdan/SGEXT

Spatial Graph Extractor. Library and scripts to study graphs extracted from binary images, or to generate graphs and analyze them completely in-silico. Used at least in biopolymers simulations and vascular networks.

phcerdan/KitwareBeamerMetropolis

phcerdan/ITKIsotropicWavelets

External Module for ITK, implementing Isotropic Wavelets and Riesz Filter for multiscale phase analysis.

phcerdan/insightjournal-dev

Insightjournal development scripts

phcerdan/phcerdan.github.io

:triangular_ruler: A flexible two-column Jekyll theme. Perfect for personal sites, blogs, and portfolios hosted on GitHub or your own server.

phcerdan/deep-reinforcement-learning

Repo for the Deep Reinforcement Learning Nanodegree program

phcerdan/DGtal

Digital Geometry Tools and Algorithm Library

phcerdan/DiT

Official PyTorch Implementation of "Scalable Diffusion Models with Transformers"

phcerdan/eigen

Third-party Eigen library used internally in ITK. Offical upstream repository at https://gitlab.com/libeigen/eigen

phcerdan/freesurfer

Neuroimaging analysis and visualization suite

phcerdan/glove80-zmk-config

phcerdan/ITK

Insight Segmentation and Registration Toolkit -- Mirror

phcerdan/ITKDoxygen

ITK Doxygen nightly built with GitHub Actions and published to GitHub Pages

phcerdan/ITKExamples

Cookbook examples for the Insight Toolkit documented with Sphinx

phcerdan/kaggle-HuBMAP

HuBMAP - Hacking the Human Vasculature (Kaggle Competition)

phcerdan/kimimaro

Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

phcerdan/lapack

LAPACK development repository

phcerdan/magma-nvim

Interact with Jupyter from NeoVim.

phcerdan/mdai-utils

Utility functions for MD.ai. Download and upload 2D and 3D segmentation images.

phcerdan/neurodocker

Generate custom Docker and Singularity images, and minimize existing containers

phcerdan/non-stationary_texture_syn

Code used for texture synthesis using GAN

phcerdan/open_spiel

OpenSpiel is a collection of environments and algorithms for research in general reinforcement learning and search/planning in games.

phcerdan/pthread-win32

clone / cvs-import of pthread-win32 + local tweaks (including MSVC2008 - MSVC2019 project files)

phcerdan/scikit-build

Improved build system generator for CPython C, C++, Cython and Fortran extensions

phcerdan/Slicer

Multi-platform, free open source software for visualization and image computing.

phcerdan/stylegan3

Official PyTorch implementation of StyleGAN3

phcerdan/SynthSeg

Contrast-agnostic segmentation of MRI scans

phcerdan/vimspector

vimspector - A multi-language debugging system for Vim