Pinned Repositories
BBMap
(Not Offical) BBMap short read aligner, and other bioinformatic tools.
default_environment
Code and documentation of my preferred default environment
dnds_COGenT
Pipeline for calculating dn/ds.
ete
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
NeverSink-Filter
This is a lootfilter for the game "Path of Exile". It hides low value items, uses a markup-scheme and sounds to highlight expensive gear and is based on economy data mining.
Perth2009-DMS-Manuscript
manuscript for deep mutational scanning of Perth/2009 H3N2 HA
philarevalo.github.io
Phil Arevalo's personal website
PopCOGenT
Microbial Populations as Clusters Of Gene Transfer
RiboTree
Pipeline to make a phylogeny from ribosomal proteins pulled from microbial genomes
rmarkdown
Dynamic Documents for R
philarevalo's Repositories
philarevalo/PopCOGenT
Microbial Populations as Clusters Of Gene Transfer
philarevalo/RiboTree
Pipeline to make a phylogeny from ribosomal proteins pulled from microbial genomes
philarevalo/dnds_COGenT
Pipeline for calculating dn/ds.
philarevalo/rmarkdown
Dynamic Documents for R
philarevalo/BBMap
(Not Offical) BBMap short read aligner, and other bioinformatic tools.
philarevalo/default_environment
Code and documentation of my preferred default environment
philarevalo/ete
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
philarevalo/NeverSink-Filter
This is a lootfilter for the game "Path of Exile". It hides low value items, uses a markup-scheme and sounds to highlight expensive gear and is based on economy data mining.
philarevalo/Perth2009-DMS-Manuscript
manuscript for deep mutational scanning of Perth/2009 H3N2 HA
philarevalo/philarevalo.github.io
Phil Arevalo's personal website
philarevalo/sem-bio-wes-cis-263