Pinned Repositories
workshops
Files accompanying UW Machines Who Learn workshops
foxden
An unofficial R wrapper around the Fox Sync API
synhelper
Helper functions for interacting with Synapse with R
annotator
A Synapse annotations automation tool.
BridgeDownstream
Glue pipeline to export Bridge data as Parquet and CSV to Synapse
BridgeDownstreamHelper
A python package to help make the life of a Bridge Downstream developer easier
mhealthtools
A modular R package for extracting features from mobile sensor data
recover
A data pipeline for processing data from the RECOVER project.
philerooski's Repositories
philerooski/foxden
An unofficial R wrapper around the Fox Sync API
philerooski/synhelper
Helper functions for interacting with Synapse with R
philerooski/at-home-pd
A project for handling scripts related to AT-HOME PD (syn12617210)
philerooski/beat-pd-workflow
A collection of challenge CWL tool and workflow templates to connect with SynapseWorkflowHooks.
philerooski/bridge-etl
philerooski/bridgeclient
philerooski/digital-health-interview
philerooski/exporter2to3
Create a project with Bridge exporter 3.0 formatted data from a project which uses Bridge exporter 2.0
philerooski/interpolate_crf_module
Get interpolated distance from the 12-minute run of the CRF Module.
philerooski/ki-rally-manager
Project management code for Gates Ki
philerooski/mhealth-pipeline-poc
https://sagebionetworks.jira.com/browse/SCIENCE-1507
philerooski/mHealthTools
philerooski/mindkind-study
Scripts related to managing MindKind study data
philerooski/mjffLDOPA
Curate MJFF LDOPA dataset from files to tables
philerooski/mobile-client-json
Json Schema Draft 7 documentation for the JSON model objects used to build the iOS and Android Assessment Model.
philerooski/myvim
My vim configuration and plugins
philerooski/neurolincsdreamchallenge
philerooski/neurolincsdreamchallenge-1
philerooski/neurolincsscoring
Score Cell Tracking Results Against Gold Standard NeuroLINCS Data.
philerooski/nextflow-infra
AWS CloudFormation templates for deploying Nextflow infrastructure
philerooski/pddb2
Parkinson's Disease PD Digital Biomarker Challenge 2
philerooski/sandbox-provisioner
An service to auto provision resources on AWS scicomp
philerooski/scicomp-provisioner
An service to auto provision resources on AWS scicomp
philerooski/stepwise-study
Scripts related to managing Stepwise study data
philerooski/synapsebridgehelpers
philerooski/synapseformation
Client for using Synapse Formation templates.
philerooski/synapseforms
R Wrappers for Synapse Submission Forms
philerooski/train-tremor-model
Pipeline to get trained weights for the architecture at (syn10146135)
philerooski/wellcome-map-challenge
Wellcome MAP Challenge
philerooski/wellcome-surveillance-challenge
Wellcome Data Re-use Prize: Surveillance