Pinned Repositories
cellXY
R package to predict sex of single cells and identify Male/Female doublets using machine learning approaches
classify-sex-models
Caret models for classifySex function in speckle package
jazzPanda
A hybrid approach to find spatially relevant marker genes in image based spatial transcriptomics data
NextClone
Nextflow pipeline for extracting and counting clonal barcodes
propeller-paper-analysis
The website hosts the analysis and evaluation of different statistical methods for determining differences in cell type proportions in single cell RNA-seq data.
spaceMarker
speckle
R package for analysing single cell data
speckle_old
R package for analysing single cell data
SuperCellCyto
SuperCell for Cytometry data
supercells_for_cytometry
Supercells enhances analysis of cytometry data
phipsonlab's Repositories
phipsonlab/speckle
R package for analysing single cell data
phipsonlab/SuperCellCyto
SuperCell for Cytometry data
phipsonlab/cellXY
R package to predict sex of single cells and identify Male/Female doublets using machine learning approaches
phipsonlab/speckle_old
R package for analysing single cell data
phipsonlab/NextClone
Nextflow pipeline for extracting and counting clonal barcodes
phipsonlab/propeller-paper-analysis
The website hosts the analysis and evaluation of different statistical methods for determining differences in cell type proportions in single cell RNA-seq data.
phipsonlab/spaceMarker
phipsonlab/jazzPanda
A hybrid approach to find spatially relevant marker genes in image based spatial transcriptomics data
phipsonlab/supercells_for_cytometry
Supercells enhances analysis of cytometry data
phipsonlab/classify-sex-models
Caret models for classifySex function in speckle package
phipsonlab/jazzPanda_vignette
phipsonlab/SuperCellCyto-analysis
Code to reproduce analysis done for SuperCellCyto paper
phipsonlab/CloneDetective
R Package for interrogating clonal data
phipsonlab/NextClone-analysis
Analysis for NextClone pipeline