photocyte/git-tracked-analysis-template

A template for spinning up a new folder that can be tracked with git and exported as a .zip to Zenodo

git-tracked-analysis-template

A bespoke template for spinning up a new folder that can be tracked with git and exported as a .zip to Zenodo

Other Research Data Management (RDM) resources

File and folder organizing strategies and schemas

• https://www.projecttier.org/tier-protocol/protocol-4-0/
• https://handbook.datalad.org/basics/101-127-yoda
• https://caltechlibrary.github.io/RDMworkbook/index.html#description

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Concepts

• TidyData http://www.jstatsoft.org/v59/i10/

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Courses

• https://carpentries-incubator.github.io/managing-computational-projects/instructor/09-rdm.html#tidy-spreadsheets
• https://psychoinformatics-de.github.io/rdm-course/
• https://slides.djnavarro.net/project-structure/
• http://www2.stat.duke.edu/~rcs46/lectures_2015/01-markdown-git/slides/naming-slides/naming-slides.pdf

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Tooling

• https://github.com/vsbuffalo/scidataflow/
• https://handbook.datalad.org/en/latest/

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Coding / programming

• https://the-turing-way.netlify.app/reproducible-research/testing

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Data repositories

• https://zenodo.org
• https://journals.plos.org/plosone/s/recommended-repositories#loc-omics