Pinned Repositories
d3-renderer
Renderer for SpreaD3 JSON files.
GLEAM-phylogeography
This repo contains the analyses files for a study that connects the GLEAM (Global Epidemic and Mobility) model to phylogeography
HIVmixedEffectsClock
A mixed effects clock model application to HIV-1 groupM
phylogeography.github.io
Phylogeography material
sarbecovirus_phylogeography
SARS-CoV-2_EUR_PHYLOGEOGRAPHY
spread
Spread visualizes how viruses and other pathogens are spreading in time and space. It creates compellable shareable, interactive and time-animated visualization.
SpreaD3
Spatial Phylogenetic Reconstruction of Evolutionary Dynamics 3
SPREADv1
Spatial Phylogenetic Reconstruction of Evolutionary Dynamics
travelHistory
Repo associated with a manuscript on including travel history in Bayesian phylogeographic inference
phylogeography's Repositories
phylogeography/SPREADv1
Spatial Phylogenetic Reconstruction of Evolutionary Dynamics
phylogeography/spread
Spread visualizes how viruses and other pathogens are spreading in time and space. It creates compellable shareable, interactive and time-animated visualization.
phylogeography/SpreaD3
Spatial Phylogenetic Reconstruction of Evolutionary Dynamics 3
phylogeography/HIVmixedEffectsClock
A mixed effects clock model application to HIV-1 groupM
phylogeography/travelHistory
Repo associated with a manuscript on including travel history in Bayesian phylogeographic inference
phylogeography/d3-renderer
Renderer for SpreaD3 JSON files.
phylogeography/GLEAM-phylogeography
This repo contains the analyses files for a study that connects the GLEAM (Global Epidemic and Mobility) model to phylogeography
phylogeography/phylogeography.github.io
Phylogeography material
phylogeography/sarbecovirus_phylogeography
phylogeography/SARS-CoV-2_EUR_PHYLOGEOGRAPHY
phylogeography/SpreaD3-tutorial
Tutorial describing how to use the software
phylogeography/spreaD3-web
REST Web Services to spreaD3
phylogeography/spreaD3-web-ui
User interface for Spread3-web.