pjl54

Patrick Leo. Digital pathology scientist at Genentech

Genentech

Pinned Repositories

HistoQC
HistoQC is an open-source quality control tool for digital pathology slides
Language:JavaScript270 9 247106
HistoQC
HistoQC is an open-source quality control tool for digital pathology slides
Language:Python0 0 01
matlab-feature-extraction
Language:MATLAB1 1 01
MatSurv
Survival analysis in MATLAB
Language:MATLAB11
openslide-matlab
A MATLAB library providing bindings to the C library OpenSlide (https://github.com/openslide/openslide) used for reading whole-slide images.
Language:MATLAB0 0 01
PytorchDigitalPathology
An implementation of Unet for pytorch designed for digital pathology segmentation
Language:Jupyter Notebook0 0 01
qupath
QuPath - Open Source Digital Pathology
Language:Java0 0 01
qupath_scripts
Language:Groovy5 1 12
Util
Language:MATLAB2 3 03
WSI_handling
Class for getting ROIs and masks from annotated pyramidal images. A work in progress.
Language:Python12 1 62

pjl54's Repositories

pjl54/WSI_handling
Class for getting ROIs and masks from annotated pyramidal images. A work in progress.
Language:Python12 1 62
pjl54/qupath_scripts
Language:Groovy5 1 12
pjl54/Util
Language:MATLAB2 3 03
pjl54/matlab-feature-extraction
Language:MATLAB1 1 01
pjl54/MatSurv
Survival analysis in MATLAB
Language:MATLAB11
pjl54/HistoQC
HistoQC is an open-source quality control tool for digital pathology slides
Language:Python0 0 01
pjl54/openslide-matlab
A MATLAB library providing bindings to the C library OpenSlide (https://github.com/openslide/openslide) used for reading whole-slide images.
Language:MATLAB0 0 01
pjl54/PytorchDigitalPathology
An implementation of Unet for pytorch designed for digital pathology segmentation
Language:Jupyter Notebook0 0 01
pjl54/qupath
QuPath - Open Source Digital Pathology
Language:Java0 0 01