Pinned Repositories
ScarMapper
Method to map double strand break repair scars at defined loci
opentrons
Software for writing protocols and running them on the Opentrons Flex and Opentrons OT-2
hatchet
HATCHet (Holistic Allele-specific Tumor Copy-number Heterogeneity) is an algorithm that infers allele and clone-specific CNAs and WGDs jointly across multiple tumor samples from the same patient, and that leverages the relationships between clones in these samples.
MultiLyGAN
nfsim
A general-purpose, stochastic, biochemical reaction simulator for large reaction networks
setup-template-cython
Setuptools-based `setup.py` template for Cython projects
SnpEff
VCF_Analysis
Collection of tools to analyze svABA data
Volundr_GUI
User interface for writing Volundr options file.
Volur
Single Cell Sequencing Analysis
pkMyt1's Repositories
pkMyt1/hatchet
HATCHet (Holistic Allele-specific Tumor Copy-number Heterogeneity) is an algorithm that infers allele and clone-specific CNAs and WGDs jointly across multiple tumor samples from the same patient, and that leverages the relationships between clones in these samples.
pkMyt1/MultiLyGAN
pkMyt1/nfsim
A general-purpose, stochastic, biochemical reaction simulator for large reaction networks
pkMyt1/setup-template-cython
Setuptools-based `setup.py` template for Cython projects
pkMyt1/SnpEff
pkMyt1/VCF_Analysis
Collection of tools to analyze svABA data
pkMyt1/Volundr_GUI
User interface for writing Volundr options file.
pkMyt1/Volur
Single Cell Sequencing Analysis