/bivariate-genomic-footprinting

Scripts to run footprinting and motif-flanking accessibility analysis in DNase-seq/ ATAC-seq data

Primary LanguageR

Bivariate-Genomic-Footprinting

Code for footprinting and motif-flanking accessibility in Yun et al. The analysis was performed using BaGFoot.

Yun H, et al. Mutational synergy during leukemia induction remodels chromatin accessibility, histone modifications and three-dimensional DNA topology to alter gene expression. Nat Genet. 2021 Oct;53(10):1443-1455.