Pinned Repositories
AM_2024
Analaysis for the batch correction paper
BFCounter
bifrost
Bifrost: Highly parallel construction and indexing of colored and compacted de Bruijn graphs
BUSZ_paper
dbg
Naive de Bruijn graph implementation in python
KmerStream
Streaming algorithm for computing kmer statistics for massive genomics datasets
mindex
mindex: a tool for indexing genomes for screening set of reads
pizzly
Fast fusion detection using kallisto
pyGFA
GFA transformations implemented in Python
pmelsted's Repositories
pmelsted/bifrost
Bifrost: Highly parallel construction and indexing of colored and compacted de Bruijn graphs
pmelsted/pizzly
Fast fusion detection using kallisto
pmelsted/KmerStream
Streaming algorithm for computing kmer statistics for massive genomics datasets
pmelsted/dbg
Naive de Bruijn graph implementation in python
pmelsted/BFCounter
pmelsted/AM_2024
Analaysis for the batch correction paper
pmelsted/mindex
mindex: a tool for indexing genomes for screening set of reads
pmelsted/pyGFA
GFA transformations implemented in Python
pmelsted/BUSZ_paper
pmelsted/kallistoscope
pmelsted/bioconda-recipes
Conda recipes for the bioconda channel.
pmelsted/ckeditor4-react
Official CKEditor 4 React component.
pmelsted/CloudCoder
A web-based programming exercise system.
pmelsted/homebrew-science
:microscope: Scientific formulae for the Homebrew package manager
pmelsted/kallisto
Near optimal RNA-Seq quantification
pmelsted/kallisto-sleuth-workshop-2016
materials and website for the 2016 kallisto sleuth workshop
pmelsted/klib
A standalone and lightweight C library
pmelsted/kmerthon
pmelsted/streaming-talk
pmelsted/structure
The structure software