polojacky

Bioinformatics, big data, machine learning.

ReviRBeijing, China

Pinned Repositories

12306
12306智能刷票，订票
Language:Python0 0 00
a-cartoon-intro-to-redux-cn
看漫画，学 Redux。不写一行代码，轻松看懂 Redux 原理！
Language:HTML0 1 00
ADBench
Official Implement of "ADBench: Anomaly Detection Benchmark", NeurIPS 2023.
Language:Python0 0 00
aegi-web
website of aegi
Language:HTML0 1 03
ARACNe-AP
Network Reverse Engineering through AP inference of Mutual Information
Language:Java0 1 01
arcasHLA
Fast and accurate in silico inference of HLA genotypes from RNA-seq
Language:Python0 0 00
athena_meta
read cloud assembler
Language:Python0 1 00
Auto-GPT
An experimental open-source attempt to make GPT-4 fully autonomous.
Language:Python00
picasso
:art: A CNN visualizer
Language:Python1 1 00
SPADEVizR
SPADEVizR: an R package for Visualization, Analysis and Integration of SPADE results.
Language:R1 1 00

polojacky's Repositories

polojacky/athena_meta
read cloud assembler
Language:Python0 1 00
polojacky/awesome-single-cell
List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
0 0
polojacky/canu
A single molecule sequence assembler for genomes large and small.
Language:C++0 0
polojacky/dynverse
A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. 🌍
Language:R
polojacky/fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
polojacky/feather
Feather: fast, interoperable binary data frame storage for Python, R, and more powered by Apache Arrow
Language:C++0 0
polojacky/forceatlas2
Fastest Gephi's ForceAtlas2 graph layout algorithm implemented for Python and NetworkX
Language:Python
polojacky/hail
Scalable genomic data analysis.
Language:Scala0 0
polojacky/hgvs
Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
Language:Python0 0
polojacky/HumanLiver
R Data: Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations
Language:R
polojacky/IAP
Illumina analysis pipeline
Language:Perl0 0
polojacky/insightface
Face Analysis Project on MXNet
Language:Python
polojacky/liger
R package for integrating and analyzing multiple single-cell datasets
Language:R0 0
polojacky/lumpy-sv
lumpy: a general probabilistic framework for structural variant discovery
Language:C1 0
polojacky/manta
Structural variant and indel caller for mapped sequencing data
Language:C++0 0
polojacky/mnnpy
An implementation of MNN (Mutual Nearest Neighbors) correct in python.
Language:Python
polojacky/Multicore-TSNE
Parallel t-SNE implementation with Python and Torch wrappers.
Language:C++
polojacky/nanosv
SV caller for nanopore data
Language:Python
polojacky/pypairs
PyPairs - A python scRNA-Seq classifier
Language:Python1 0
polojacky/Python
All Algorithms implemented in Python
Language:Python1 0
polojacky/rtg-tools
RTG Tools: Utilities for accurate VCF comparison and manipulation
Language:Java
polojacky/SCALE
Single-cell ATAC-seq analysis via Latent feature Extraction
polojacky/scanpy_usage
Scanpy use cases.
Language:HTML1 0
polojacky/SCENIC
SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
Language:R0 0
polojacky/scRNA-tools
Table of software for the analysis of single-cell RNA-seq data.
polojacky/selene
a framework for training sequence-level deep learning networks
Language:Jupyter Notebook0 0
polojacky/seqr
web-based analysis tool for rare disease genomics
Language:PLSQL1 0
polojacky/singleCellNet
SingleCellNet: classify single cells across species and platforms
Language:R
polojacky/Sniffles
Structural variation caller using third generation sequencing
Language:HTML0 0
polojacky/TDengine
An open-source big data platform designed and optimized for the Internet of Things (IoT).
Language:C