Pinned Repositories
aws-iot-device-sdk-cpp
SDK for connecting to AWS IoT from a device using C++
aws-iot-device-sdk-embedded-C
SDK for connecting to AWS IoT from a device using embedded C.
bird-malaria-uce-phylo
C-WAP
SC2 variant detection and composition pipeline
GRFP
Here are a set of example Relevant Background and Future Goals and Graduate Research Plan Statement statements for the NSF GRFP in Ecology and Evolutionary Biology.
illumiprocessor
pre-process illumina reads
MCMCglmm
MCMCglmm analysis, bayesian, phylogenetic mixed effects models
Phase_hybrid_from_next_gen
Have you got a hybrid in your ultra-conserved element dataset, and you want to confirm its parent species? Then boy, do I have the pipeline for you!
postdoc_funding
A non-exhaustive list of postdoctoral funding opportunities.
wastewater-covidseq
Wastewater sequencing data analysis
poojasgupta's Repositories
poojasgupta/wastewater-covidseq
Wastewater sequencing data analysis
poojasgupta/MCMCglmm
MCMCglmm analysis, bayesian, phylogenetic mixed effects models
poojasgupta/bird-malaria-uce-phylo
poojasgupta/aws-iot-device-sdk-cpp
SDK for connecting to AWS IoT from a device using C++
poojasgupta/aws-iot-device-sdk-embedded-C
SDK for connecting to AWS IoT from a device using embedded C.
poojasgupta/C-WAP
SC2 variant detection and composition pipeline
poojasgupta/docker-builds
:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
poojasgupta/GRFP
Here are a set of example Relevant Background and Future Goals and Graduate Research Plan Statement statements for the NSF GRFP in Ecology and Evolutionary Biology.
poojasgupta/illumiprocessor
pre-process illumina reads
poojasgupta/Phase_hybrid_from_next_gen
Have you got a hybrid in your ultra-conserved element dataset, and you want to confirm its parent species? Then boy, do I have the pipeline for you!
poojasgupta/postdoc_funding
A non-exhaustive list of postdoctoral funding opportunities.
poojasgupta/Freyja
Depth-weighted De-Mixing
poojasgupta/github-slideshow
A robot powered training repository :robot:
poojasgupta/ncov
Nextstrain build for novel coronavirus SARS-CoV-2
poojasgupta/pango-designation
Repository for suggesting new lineages that should be added to the current scheme
poojasgupta/pango_aliasor
Utility to alias and dealias pango lineages
poojasgupta/phd
A list of resources on how/why to do a PhD
poojasgupta/phyluce
software for UCE (and general) phylogenomics
poojasgupta/pigx_sarscov2_ww
PiGx SARS-CoV2 wastewater sequencing pipeline
poojasgupta/sarscov2barcode
Assign clades to SarsCov2 samples
poojasgupta/statements
Successful Job Applications and Grants
poojasgupta/swga
Select primer sets for selective whole genome amplification (SWGA)
poojasgupta/tldr
📚 Collaborative cheatsheets for console commands
poojasgupta/variant_definitions
poojasgupta/Wastewater_viral_enrichment
Viral metagenomics of wastewater samples
poojasgupta/wastewater_viromics_sarscov2
poojasgupta/WasteWaterVariantCalling