Pinned Repositories
Almog-et-al.-Matlab-code
Matlab code used in the paper by Almog et al. 2019
barcode
Code for barcode detection and strength tracking
BolkanStoneEtAl
code to analyze data/generate plots in Bolkan, Stone et al (2022)
buzcode
Code for internal lab sharing - polishing has started but is by no means complete
CaImDecoding
Decoding behavior from calcium imaging data
CellSorter
Classification using UMAP and kmeans
Class-Decoding
Supervised and unsupervised techniques to decode signals from a population of neurons: the case of head-direction cells.
CMBHOME
MATLAB Package for Neural Data
DABEST-Matlab
MATLAB package to generate contrast plots
norman
A package for automation of the novel object recognition behavioural assay in neuroscience studies. The Novel Object Recognition Mouse Analysis Network (NORMAN) system.
popkillerhehe's Repositories
popkillerhehe/norman
A package for automation of the novel object recognition behavioural assay in neuroscience studies. The Novel Object Recognition Mouse Analysis Network (NORMAN) system.
popkillerhehe/barcode
Code for barcode detection and strength tracking
popkillerhehe/BolkanStoneEtAl
code to analyze data/generate plots in Bolkan, Stone et al (2022)
popkillerhehe/buzcode
Code for internal lab sharing - polishing has started but is by no means complete
popkillerhehe/CaImDecoding
Decoding behavior from calcium imaging data
popkillerhehe/CellSorter
Classification using UMAP and kmeans
popkillerhehe/Class-Decoding
Supervised and unsupervised techniques to decode signals from a population of neurons: the case of head-direction cells.
popkillerhehe/CMBHOME
MATLAB Package for Neural Data
popkillerhehe/data_analysis
popkillerhehe/DeepInsight-1
A methodology to transform a non-image data to an image for convolution neural network architecture
popkillerhehe/dspca
Demixed subspace principal component analysis (dsPCA). This is a dimensionality reduction algorithm for high-dimensional data such as neural population activity.
popkillerhehe/FPA
Fiber photometry analysis
popkillerhehe/glmhmm
code to fit GLMs, HMMs, and GLM-HMMs (aka IO-HMMs)
popkillerhehe/LFP_analysis
popkillerhehe/Maboudi_et_al_2022
popkillerhehe/MS_mod_tSC
MATLAB code for analyzing the connection between the medial septum and hippocampal oscillations beyond the theta rhythm.
popkillerhehe/ms_sync_analysis
Code for analyzing synchrony between the medial septum and the hippocampus.
popkillerhehe/Neural_Decoding
A python package that includes many methods for decoding neural activity
popkillerhehe/NeuroAlgo
popkillerhehe/Papers
code used for each specific projects
popkillerhehe/pynapple
PYthon Neural Analysis Package :pineapple:
popkillerhehe/RatCatcher
A general tool for passing data to the cluster
popkillerhehe/seqNMF
An algorithm for unsupervised discovery of sequential structure
popkillerhehe/spikes
cortex lab code for electrophysiology
popkillerhehe/srinivas.gs_mtools
A collection of small functions and MATLAB tools, some that I have written.
popkillerhehe/ssm
Bayesian learning and inference for state space models
popkillerhehe/test
popkillerhehe/ThetaForwardReverseCode
Data Analysis Code For Wang et al., Science, 2020
popkillerhehe/tmEMD
Tailored Masked Empirical Mode Decomposition
popkillerhehe/Zheng-et-al-Nat-Comm-2021