populse/capsul

Issues

• Capsul doc compilation hangs indefinitely on the 5.1 branch

  #358 opened 10 months ago by ylep
  3

• Function definition does not bind loop variable `metadata`

  #354 opened 10 months ago by DimitriPapadopoulos
  1

• Star-arg unpacking after a keyword argument is strongly discouraged

  #355 opened 10 months ago by DimitriPapadopoulos
  1

• Bugbear must be selected

  #351 opened 10 months ago by DimitriPapadopoulos
  1

• metadata values change when a GUI is opened on them

  #348 opened a year ago by denisri
  1

• Problem with internal weakref

  #341 opened a year ago by sapetnioc
  2

• Evaluate Capsul v3 overhead when running many Morphologist pipelines

  #278 opened 2 years ago by sapetnioc
  5

• Axon bindings broken due to missing Process.metadata_schema

  #329 opened a year ago by ylep
  2

• defining processes and pipelines schemas is too complex

  #293 opened a year ago by denisri
  12

• Execution context and modules activation for execution

  #338 opened a year ago by denisri
  4

• Do we provide convenience methods to run FSL, Freesurfer etc ?

  #335 opened a year ago by denisri
  1

• Use BrainVISA interface to select Capsul pipeline

  #302 opened a year ago by sapetnioc
  3

• Test using SPM with Capsul v3

  #304 opened a year ago by sapetnioc
  1

• Capsul 3.0 depends on sulci-nonfree indirectly, so is broken in the opensource distro

  #327 opened a year ago by ylep
  3

• Decide and document where to store metadata schemas and process schemas

  #328 opened a year ago by denisri
  0

• dispose and clean an execution in the engine is not possible so far

  #318 opened a year ago by denisri
  0

• Working directory of processes & how to handle relative file paths

  #305 opened a year ago by ylep
  1

• Attributes of fields defined at the class level should not be shared between instances

  #325 opened a year ago by ylep
  11

• Add Input/Output parameter support to avoid the need of artificial fields

  #322 opened a year ago by nsouedet
  2

• Nipype traits in capsul

  #316 opened a year ago by Hboni
  6

• Add a "category" or "section" parameter to Field class for display purpose

  #324 opened a year ago by nsouedet
  0

• Make Highres Cortex usable with Capsul v3

  #303 opened a year ago by sapetnioc
  0

• Make NIT usable with Capsul v3

  #300 opened a year ago by sapetnioc
  0

• Use modern Python project layout for Capsul, soma-base and populse_db

  #298 opened a year ago by sapetnioc
  0

• Make longitudinal pipelines compatible with Capsul v3

  #301 opened a year ago by sapetnioc
  0

• Make Brainrat usable with Capsul v3

  #299 opened a year ago by sapetnioc
  0

• Processes and pipeline creation

  #273 opened a year ago by sapetnioc
  2

• Change switch creation API

  #275 opened a year ago by sapetnioc
  8

• Retest SQLite based implementation of execution database

  #297 opened a year ago by sapetnioc
  0

• Complete execution control in the client API ?

  #296 opened a year ago by denisri
  2

• Processing database persistence

  #292 opened a year ago by sapetnioc
  2

• unstabilities with redis connections

  #291 opened a year ago by denisri
  2

• Nipype's mutually exclusive parameters bug

  #289 opened a year ago by servoz
  1

• inconsistency in Pipeline.get_linked_items() and dispatch_plugs()

  #286 opened a year ago by denisri
  1

• Provide control over metadata propagation during path completion

  #284 opened a year ago by denisri
  1

• tests on populse_mia are currently failing

  #283 opened 2 years ago by servoz
  9

• failing test in v3: test_nipype_wrap with SPM config

  #282 opened 2 years ago by denisri
  0

• Toolboxes definition and implementation

  #268 opened 2 years ago by sapetnioc
  3

• capsul.process.Process.check_requirements() return

  #280 opened 2 years ago by servoz
  6

• Configure nipype with SPM12 standalone

  #279 opened 2 years ago by rbregand
  6

• What about custom nodes ?

  #277 opened 2 years ago by sapetnioc
  0

• Adapt pipeline creation GUI to v3

  #276 opened 2 years ago by sapetnioc
  0

• Processes documentation

  #270 opened 2 years ago by sapetnioc
  2

• Capsul documentation

  #274 opened 2 years ago by sapetnioc
  0

• Processes discovery and organization

  #269 opened 2 years ago by sapetnioc
  0

• GUI for process execution

  #271 opened 2 years ago by sapetnioc
  0

• Data visualization

  #272 opened 2 years ago by sapetnioc
  0

• Tests fail with Redis 4.5.0

  #261 opened 2 years ago by sapetnioc
  1

• Drop AppVeyor CI

  #262 opened 2 years ago by sapetnioc
  3

• Documentation page generation is failing

  #259 opened 2 years ago by sapetnioc
  8