Pinned Repositories
ASTRAL
Accurate Species TRee ALgorithm
awesome-datascience
:memo: An awesome Data Science repository to learn and apply for real world problems.
awesome-deepbio
A curated list of awesome deep learning applications in the field of computational biology
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
awesome_spatial_omics
tools and notes for spatial omics
biostar-tutorials
Code for biostar tutorials - mostly R and Perl
blog_posts
Blog posts for matatat.org
bootcamp-central
PSU bootcamp on reproducible research
bootcamp_test
practice_folder
prakashraaz's Repositories
prakashraaz/awesome-deepbio
A curated list of awesome deep learning applications in the field of computational biology
prakashraaz/awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
prakashraaz/awesome_spatial_omics
tools and notes for spatial omics
prakashraaz/cheatsheets
RStudio Cheat Sheets
prakashraaz/chipseq_2023
prakashraaz/CLASS_2023
prakashraaz/cornell-cs5785-applied-ml
Teaching materials for the applied machine learning course at Cornell Tech
prakashraaz/course-v3
The 3rd edition of course.fast.ai
prakashraaz/cracking-the-data-science-interview
A Collection of Cheatsheets, Books, Questions, and Portfolio For DS/ML Interview Prep
prakashraaz/data-science-1
:bar_chart: Path to a free self-taught education in Data Science!
prakashraaz/Intro-to-shell-flipped
prakashraaz/jupyter
Jupyter metapackage for installation, docs and chat
prakashraaz/ksrates
ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-ortholog Ks distributions.
prakashraaz/My_pbs_scripts
prakashraaz/ngmlr
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
prakashraaz/prakashraaz
Config files for my GitHub profile.
prakashraaz/Programming_notes
Programming-related notes
prakashraaz/python-cheatsheet
Comprehensive Python Cheatsheet
prakashraaz/scRNA-seq_online
prakashraaz/SingeCellMultiOmicsNetwork
Repository for book chapter titled "Gene regulatory network modelling using single-cell multi-omics in plants"
prakashraaz/spatial_scog_workshop_2022
Tutorials for the SCOG Virtual Workshop ‘Spatial transcriptomics data analysis in Python’ - May 23-24, 2022
prakashraaz/SummerGenomics
prakashraaz/test_miscellaneous
prakashraaz/tidytuesday
Official repo for the #tidytuesday project
prakashraaz/Training-modules
Materials for short, half-day workshops
prakashraaz/Udemy---Machine-Learning
Notebooks for Course
prakashraaz/utilities
Some functions in R
prakashraaz/workshop-scRNAseq
Single cell RNA sequencing analysis course
prakashraaz/workshop_omics_integration
Workshop in omics integration and systems biology
prakashraaz/zero-to-mastery-ml
All course materials for ZTM ML on Udemy