/RNA_smRNA_CL_VAE

Primary LanguagePython

RNA_smRNA_CL_VAE

Quickstart

Call from this directory w/ proper config file.

$ python model/train.py configs/rna_config.yml

Notes

  • Add data download pipeline for TCGA (note, smrna-seq indexing done elsewhere)

  • Add tests and module info, add requirements file, setup... see algs formatting guidelines.

  • Add directory map and structure for module packaging

  • Clean imports

  • Need to fix zinb, nb for unimodal vae; particularly for smRNA implementation

  • add github make file