Drug Drug Interaction Prediction

This is a project to leverage Deep learning to predict drug-drug interactions.

Motivation:

Drug Interactions are a major cause for drug recalls and affect 5% to 30 % of all adverse events.

Presentation Slides

Further details regarding the motivation, methods and results of implementing this idea can be found in my presentation here : http://bit.ly/DrugInteractionSlides

Install Scripts:

The package as well as the necessary requirements can be installed by running make or via

python setup.py install

Training a Model:

For Training the model run the following train.sh script - there are 3 alternatives, ECFP, SMILES, Transfer_Learning

Inference :

For Inference with multiple drugs, use the inference_from_file.sh script. For single inference use the inference.sh script

pratik008/Adverse-Drug-Interaction