priscalim00

Bioinformatician in the Andermann Lab at the UNC School of Medicine.

UNC School of MedicineChapel Hill, NC

Pinned Repositories

18S-Metabarcoding-Bioinformatics-Pipeline
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Bioinformatics_Scripts
This repository holds all bioinformatic scripts used to process DNA sequencing data in the Andermann Lab (UNC School of Medicine)
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Mucositis_Microbiome
Investigation on the role of microbiome in patients who developed mucositis while under going allogeneic hematopoietic stem cell transplant (allo HSCT)
Language:Shell00
reproducible_research
Website for the Riffomonas Reproducible Research Tutorial Series
Language:HTML00
snippy
:scissors: :zap: Rapid haploid variant calling and core genome alignment
Language:Perl492117
CheckM
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Language:Python35773
inStrain
Bioinformatics program inStrain
Language:Python15734
reproducible_research
Website for the Riffomonas Reproducible Research Tutorial Series
Language:HTML3518
athena_meta
read cloud assembler
Language:Python348
GraphBin2
☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs
Language:Python333

priscalim00/18S-Metabarcoding-Bioinformatics-Pipeline
priscalim00/Antibiotics_Resistance
This project aims to characterize antibiotics tolerance development over time in patients undergoing bone marrow transplant (BMT)
Language:HTML
priscalim00/Mucositis_Microbiome
Investigation on the role of microbiome in patients who developed mucositis while under going allogeneic hematopoietic stem cell transplant (allo HSCT)
Language:Shell
priscalim00/reproducible_research
Website for the Riffomonas Reproducible Research Tutorial Series
Language:HTML