pritampanda15
Bioinformatician | Data Scientist
German Cancer Research Center (DKFZ) Heidelberg, Germany
Pinned Repositories
AutodockGPU
CytoExploreR-Interactive-visualization
CytoExploreR: A Comprehensive Open-Source R Package for Interactive Cytometry Data Analysis
ML-MaterialsScience
Molecular-Dynamics
Self explained tutorial for molecular dynamics simulation using gromacs
nextflow-R-Seurat
RNAseq pipeline using Nextflow
R-pipeline-for-scrnaseq
R Quarto code for scRNAseq
Raman-Phonon-VASP
Tutorial
Siesta
FDF files for relaxation, PDOS and Denchar calculations in SIESTA 4.0.2 version as well as 4.1v and PSML supported version
snakemake-scRNAseq-analysis
R Quarto code for scRNAseq
wxDragon
pritampanda15's Repositories
pritampanda15/Raman-Phonon-VASP
Tutorial
pritampanda15/pritampanda15
pritampanda15/docker-scrnaseq
pritampanda15/open-interpreter
A natural language interface for computers
pritampanda15/project-based-learning
Curated list of project-based tutorials
pritampanda15/nextflow-R-Seurat
RNAseq pipeline using Nextflow
pritampanda15/R-pipeline-for-scrnaseq
R Quarto code for scRNAseq
pritampanda15/snakemake-scRNAseq-analysis
R Quarto code for scRNAseq
pritampanda15/WholeExomeSequencing-Pipeline
pritampanda15/Automagical-R-Script-Plotting
pritampanda15/CADD_Vault
pritampanda15/Drug_designing_ML
Jupyter notebooks containing ML based approach for drug designing and chemoinformatics
pritampanda15/I-PV
Interactive Protein Sequence VIsualization/Viewer - Interactive Circos
pritampanda15/lazypredict
Lazy Predict help build a lot of basic models without much code and helps understand which models works better without any parameter tuning
pritampanda15/loupeR
Convert Seurat objects to 10x Genomics Loupe files.
pritampanda15/Machine-Learning
Machine Learning Specialization Course by Stanford and Deep Learning
pritampanda15/misato-dataset
Structure based protein-ligand affinity
pritampanda15/ML-TISCH2-scRNAseq
Repository containing various regression models implemented in Python, including Ridge, Random Forest, Gradient Boosting, SVR, and a neural network using Keras
pritampanda15/nextflow-SRAtools
Nextflow pipeline to prefetch SRA files and convert to fastq using fastq-dump
pritampanda15/nextflow-website
Nextflow public web site
pritampanda15/nf-core-qualitycontrol
Quality control of fastq files using FastQC, MultiQC, FastP and FAQCS
pritampanda15/practical_cheminformatics_tutorials
Practical Cheminformatics Tutorials
pritampanda15/PSICHIC
PSICHIC (pronounced Psychic) - PhySIcoCHemICal graph neural network for learning protein-ligand interaction fingerprints from sequence data
pritampanda15/python-docking
Notebooks and environment set up for IQB 2024 workshop
pritampanda15/r-seurat
Seurat R pipeline to process 10x .h5 files
pritampanda15/r-seurat-scripts
Scripts to install as a Bioconda package for making workflows
pritampanda15/sanbomics_scripts
scripts and notebooks from sanbomics
pritampanda15/TDC
Therapeutics Commons: Artificial Intelligence Foundation for Therapeutic Science
pritampanda15/VFVS
VirtualFlow for Virtual Screening
pritampanda15/viamd
Visual Interactive Analysis of Molecular Dynamics