/supercritical_plausibility

Code for paper on using number of disease introductions and transmission events to asses the plausibility of supercritical transmission.

Primary LanguageRGNU General Public License v3.0GPL-3.0

supercritical_plausibility

Code for paper on using number of disease introductions and transmission events to asses the plausibility of supercritical transmission.

0-libary contains some basic parameterization and function used in other files 1-Calc-Upper_CI cCode for making Figure 1 and Table 1 2-imperfect_obs Code for making Figure 2 and Table 2 Hawaii case counts - Raw data for Table 1 Hawaii_Covid_Case_Cts Tabulation of raw data on Hawaii case counts